PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080743.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 530aa MW: 61199.7 Da PI: 5.4962

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.6	4.9e-24	64	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ ++GFs+rk++ +k+k+++eit+rtfvC+keg+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028080743.1 64 DFYNTYGGKLGFSIRKAYANKNKHTKEITSRTFVCYKEGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYLACDFVEHHNHDLVP 154 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MAEMEEQRDG EQRTVGDGES GGDAMVGRRH CGDSEVMEES NIVDDCGWKP KVGMPFDSEQ 60 AAYDFYNTYG GKLGFSIRKA YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV 120 RCGCGARFSI KLDRISGKYL ACDFVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELASQ 180 SGIPLRSAYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKTVEN 240 PSFFYAVQLD CDEQISNIFW ADAQMIMDYA QFGDVVTFDT TYKLNNEHRP FGSFVGFNHH 300 RETVIFGAAL MYDETAESFT WLFQIFLEAM SNKAPKTIFT DQDAAMAKAI PIVMPDTNHR 360 LCTWHLMQNA VKHVSSVFDD VGVKAVFSKF MHDIDDEEQF RIQWDQMLDK YDAFDNHWLE 420 QTFRVKEKWG WPYIRNSWAA GMSTTQLSES FNAFLKDYLN CDHNLMEFFK HFERVLYEKR 480 YKELEEAVIV PKIAEGFNSN CDVKASGRDL HENNFEEFQN EYVQSIEASI

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MAEMEEQRDG EQRTVGDGES GGDAMVGRRH CGDSEVMEES NIVDDCGWKP KVGMPFDSEQ  60
AAYDFYNTYG GKLGFSIRKA YANKNKHTKE ITSRTFVCYK EGSRGIDKRD PLVKNPRQEV  120
RCGCGARFSI KLDRISGKYL ACDFVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELASQ  180
SGIPLRSAYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKTVEN  240
PSFFYAVQLD CDEQISNIFW ADAQMIMDYA QFGDVVTFDT TYKLNNEHRP FGSFVGFNHH  300
RETVIFGAAL MYDETAESFT WLFQIFLEAM SNKAPKTIFT DQDAAMAKAI PIVMPDTNHR  360
LCTWHLMQNA VKHVSSVFDD VGVKAVFSKF MHDIDDEEQF RIQWDQMLDK YDAFDNHWLE  420
QTFRVKEKWG WPYIRNSWAA GMSTTQLSES FNAFLKDYLN CDHNLMEFFK HFERVLYEKR  480
YKELEEAVIV PKIAEGFNSN CDVKASGRDL HENNFEEFQN EYVQSIEASI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein