PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080486.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 411aa    MW: 45703.9 Da    PI: 5.3593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.7e-07217264455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er R ++i ++   L++l+P +    +k   Ka +L + ++Y++sLq
  XP_028080486.1 217 SHSLAERVRSKKISERTKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 264
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MFRLQNKNYT SIKDSPEVEA FEGNELNSVF SLPPQGQQFQ GGDHMSLNKL MTRTMKTDPG  60
MENGWTDFGQ FTGDFGFEFG FEMNYGLSKT TSYPAAAISE GAVTATAVTE AKQRDSSVLP  120
EKMSFKKRKA DKSHNLKAVA EEEDCKEKRI RGCTEQGESK ITEQNSNSDN DSKNTSNNNN  180
NKRETSADTS KENSKVSEVQ KPDYIHVRAR RGQATDSHSL AERVRSKKIS ERTKYLQDLV  240
PGCNKITGKA GMLDEIINYV QSLQRQVEIE NIFLSMKLAA VNPTLDFNID NFVVTEVFSA  300
CTSNFPIEVS SEIANPAYLQ FNPLQQVVSC SGLEMGINAP DMALRRTISA PVSSPETFLD  360
SSCFKHIQSS SAWEANLHNL YGVEFLQGRS PSFQAQQFTG SNEASNLKMD I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.17e-60bHLH family protein