PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080242.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 458aa MW: 49960.3 Da PI: 7.028

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00057	351	383	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A+ YIk Lq XP_028080242.1 351 DKITALQQIVSPF-----GKTDTASVLGEAIGYIKFLQ 383 7888889998887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MPEECNETSI ATSPATLNWW PDLHVSSLSS WSSNTNTNNN NPWQPQNPNS NSSGEEDVSI 60 STSFTNASNQ SSLSVDLESS RHIVESASAN ELIGKTASDN QLWSHVLLSI GTSGELNNTQ 120 EIGHNNILSS KGLSTGMMFE PACDYLKKMD NSWEFTNPQS VINNFEKHFN GFNEGLIESE 180 RLNKLPSSLV NNWSIAPPDS EINSSIYRFS AQPDICHSKQ SVSNPTTFSG SINRNSDVPC 240 NGTRSFGDAM SSNSFLSKPI VGVHASKPSL RSLSLSDCKK QGIQASSHPT ISTTSHTVTR 300 SNGRGGQGIA SEGKKKRSED NSETPTKKPK HDTSSTLSSS KMQVTKVKLG DKITALQQIV 360 SPFGKTDTAS VLGEAIGYIK FLQEQVQMQL LSNPYMKSNV NKMEPWGGLD RNERGGDVKV 420 DLKSRGLCLV PISCTPQVCR DNTGSDYWTP TYRGCLYR

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MPEECNETSI ATSPATLNWW PDLHVSSLSS WSSNTNTNNN NPWQPQNPNS NSSGEEDVSI  60
STSFTNASNQ SSLSVDLESS RHIVESASAN ELIGKTASDN QLWSHVLLSI GTSGELNNTQ  120
EIGHNNILSS KGLSTGMMFE PACDYLKKMD NSWEFTNPQS VINNFEKHFN GFNEGLIESE  180
RLNKLPSSLV NNWSIAPPDS EINSSIYRFS AQPDICHSKQ SVSNPTTFSG SINRNSDVPC  240
NGTRSFGDAM SSNSFLSKPI VGVHASKPSL RSLSLSDCKK QGIQASSHPT ISTTSHTVTR  300
SNGRGGQGIA SEGKKKRSED NSETPTKKPK HDTSSTLSSS KMQVTKVKLG DKITALQQIV  360
SPFGKTDTAS VLGEAIGYIK FLQEQVQMQL LSNPYMKSNV NKMEPWGGLD RNERGGDVKV  420
DLKSRGLCLV PISCTPQVCR DNTGSDYWTP TYRGCLYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	6e-62	bHLH family protein