PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079946.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 679aa MW: 78071 Da PI: 7.9555

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	6.2e-21	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a l+++k++ +w+vt + ++HnHel XP_028079946.1 62 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKTSNENKPQRNRKSSRCGCQAYLRISKTTelgAPEWRVTGFANHHNHELL 155 6************9998877356667999***********999******************99888889***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MSEEAGQMMV MYDDPSDQRS LSLDDTSSTE ESPDETRLSL ETTNDVVPYI GQRFATHDAA 60 YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKTSNE NKPQRNRKSS 120 RCGCQAYLRI SKTTELGAPE WRVTGFANHH NHELLEPNQV RFLPAYRTIS DTDKSRILIF 180 AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFR KVDPEDESID LLRMCRNIKD 240 KDSNFRFEFT LDSNNRLENI AWSYASSVQS YEIFGDAVVF DTTHRLNAFD MPLGIWVGMN 300 NYGMPCFFGC VLLREENLRS FSWALKAFLG FMNGKAPQTL LTDQNMCLKE AIAVEMPATK 360 HALCIWMIVA KFPSWFNAVL GERYNEWKAE FYRLYNLEAI EDFELGWRDM INSFGLHTNR 420 HITNLFALRS LWALPYLRSH FFAGMTTTGQ SKSINAFIQR FLSAQTRLAH FVEQVAVAVD 480 FKDQAGEQQT MQQNLQNICL KTGAPMESHA ATILTPFAFS KLQEQLILAA HYASFQMEDG 540 FLVRHHTKLE GGRKVYWVPR EGIISCSCHQ FEFSGILCRH ALRVLSTGNC FQIPERYLPL 600 RWRRISTPST RLLQSTPSDH AERVQLFQSM VSTLITESAK SKERLDIATE QVSILLSRIR 660 EQPVLSQGMR DISSIHRNL

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MSEEAGQMMV MYDDPSDQRS LSLDDTSSTE ESPDETRLSL ETTNDVVPYI GQRFATHDAA  60
YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKTSNE NKPQRNRKSS  120
RCGCQAYLRI SKTTELGAPE WRVTGFANHH NHELLEPNQV RFLPAYRTIS DTDKSRILIF  180
AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFR KVDPEDESID LLRMCRNIKD  240
KDSNFRFEFT LDSNNRLENI AWSYASSVQS YEIFGDAVVF DTTHRLNAFD MPLGIWVGMN  300
NYGMPCFFGC VLLREENLRS FSWALKAFLG FMNGKAPQTL LTDQNMCLKE AIAVEMPATK  360
HALCIWMIVA KFPSWFNAVL GERYNEWKAE FYRLYNLEAI EDFELGWRDM INSFGLHTNR  420
HITNLFALRS LWALPYLRSH FFAGMTTTGQ SKSINAFIQR FLSAQTRLAH FVEQVAVAVD  480
FKDQAGEQQT MQQNLQNICL KTGAPMESHA ATILTPFAFS KLQEQLILAA HYASFQMEDG  540
FLVRHHTKLE GGRKVYWVPR EGIISCSCHQ FEFSGILCRH ALRVLSTGNC FQIPERYLPL  600
RWRRISTPST RLLQSTPSDH AERVQLFQSM VSTLITESAK SKERLDIATE QVSILLSRIR  660
EQPVLSQGMR DISSIHRNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein