PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079808.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 785aa MW: 86193 Da PI: 6.4987

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.2	1e-15	489	527	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag +C e C+C+dC+Nk XP_028079808.1 489 ACKRCNCKKSKCLKLYCECFAAGLYCVEPCSCQDCFNKP 527 589**********************************96 PP
2	TCR	51.4	2.1e-16	574	611	1	38
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 ++k+gCnCkks+ClkkYCeCf+ g+ Cs C+Ce+CkN XP_028079808.1 574 RHKRGCNCKKSSCLKKYCECFQGGVGCSIGCRCEGCKN 611 589*********************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence
MDTPEKTQIA TPISSKFEDS PVFSYINSLS PIKPVKSIHT TQTFNSPIFA SPPSVFASPH 60 ISSHKETRSF KRNCLTDPSR PEFSNCENED NPREGILGAD KQSDLCTKQL RYLSPGSSSG 120 EIPIGAYNES SKLAIALPKS LKYVCGTSDV NTLPDNNSKA ENVPEMASTP SSLNKFATDG 180 SKERFCSIES EIKLGKIGQI EQNKEKLGCD WEKLVSDAAD LLIFDSFIIE ETSDGQVVKT 240 LNSETTSCAS TVLELPQDNN DSLQKTHAVG SCKEHDMESH VSLSGEAAKL KETNQAPENF 300 SSTLLNASNP EVNDDKDKCI HSGCKRSIRR LVFEISGVNK RRSMYNYNCG SSISLQTECN 360 FALNEMQVVS PIPEKGYSSP MIPGIGLHLN AFASTSSNIN PVKLETLASG RQLRRMPSSS 420 YSSDPLVSGQ EGPNMSLNHN SAEGNLSSCV NEVQVMEDAA SAFGVIEEFN QSSPKKKRSK 480 SEQAEESDAC KRCNCKKSKC LKLYCECFAA GLYCVEPCSC QDCFNKPTYE DTVLETRKQI 540 ESRNPLAFAP KVIMSSEPFP EFGDETNKTP SSARHKRGCN CKKSSCLKKY CECFQGGVGC 600 SIGCRCEGCK NPFGCKYGTE ETELEMEETD TSEVNASDIS LQNNVVQKAE EKLDRVLPLP 660 HSYEISRSLV RLPSFFSGKL PQSSLFGVQS SPHICTSKKP EKPEFLHGLP KFEKRLQMIP 720 EDEIPEILQD NCSPTRGVKS TSPNSKRVSP HLKLGSGRKL ILRSIPAFPS LTPQNENIKF 780 SGQSS

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence

MDTPEKTQIA TPISSKFEDS PVFSYINSLS PIKPVKSIHT TQTFNSPIFA SPPSVFASPH  60
ISSHKETRSF KRNCLTDPSR PEFSNCENED NPREGILGAD KQSDLCTKQL RYLSPGSSSG  120
EIPIGAYNES SKLAIALPKS LKYVCGTSDV NTLPDNNSKA ENVPEMASTP SSLNKFATDG  180
SKERFCSIES EIKLGKIGQI EQNKEKLGCD WEKLVSDAAD LLIFDSFIIE ETSDGQVVKT  240
LNSETTSCAS TVLELPQDNN DSLQKTHAVG SCKEHDMESH VSLSGEAAKL KETNQAPENF  300
SSTLLNASNP EVNDDKDKCI HSGCKRSIRR LVFEISGVNK RRSMYNYNCG SSISLQTECN  360
FALNEMQVVS PIPEKGYSSP MIPGIGLHLN AFASTSSNIN PVKLETLASG RQLRRMPSSS  420
YSSDPLVSGQ EGPNMSLNHN SAEGNLSSCV NEVQVMEDAA SAFGVIEEFN QSSPKKKRSK  480
SEQAEESDAC KRCNCKKSKC LKLYCECFAA GLYCVEPCSC QDCFNKPTYE DTVLETRKQI  540
ESRNPLAFAP KVIMSSEPFP EFGDETNKTP SSARHKRGCN CKKSSCLKKY CECFQGGVGC  600
SIGCRCEGCK NPFGCKYGTE ETELEMEETD TSEVNASDIS LQNNVVQKAE EKLDRVLPLP  660
HSYEISRSLV RLPSFFSGKL PQSSLFGVQS SPHICTSKKP EKPEFLHGLP KFEKRLQMIP  720
EDEIPEILQD NCSPTRGVKS TSPNSKRVSP HLKLGSGRKL ILRSIPAFPS LTPQNENIKF  780
SGQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-122	CPP family protein