PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079723.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 244aa    MW: 27784.5 Da    PI: 5.1123
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.98.6e-145698754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N++++ Lr ++Pk +      K++Ka+i + A++YI++L
  XP_028079723.1 56 VSERNRRKKLNDRLFALRAVVPKiS------KMDKASIIKDAIDYIQEL 98
                    57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MENIGDEYNN YWETNMFLQT EELDSWGLEE AALSSYYDSS SPEGSQSSLA ASKNIVSERN  60
RRKKLNDRLF ALRAVVPKIS KMDKASIIKD AIDYIQELHE QERRIQADLI QLESGKLKKN  120
AVFDLDQQIP TLSRLKKKRI DHSYDSRRST TSTIEDLELS VSYIGEKTVV VSLTCSKRTE  180
TMVKLCEVFE TLKLKIIAAN ITCFSGRVLK TVFVQADEEE KDNLKRAIES AIATLNDPES  240
PLSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-74bHLH family protein