PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079122.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 313aa    MW: 34468.7 Da    PI: 4.7385
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.72.8e-24135195158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     ++D y+WrKYGqK++ +++fpr Y+rCt++   gC ++k+v++ +edp++ +++Y g H++
  XP_028079122.1 135 MEDSYAWRKYGQKQILKAKFPRCYFRCTHKpdqGCLATKQVQKIQEDPNMYQTKYFGFHTC 195
                     58***************************9999**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGTFLPEKSC SSNRKRAVEE MIKGRDVATQ LQNLLQKPCG GDGSVLAEEL VVEILRSFTQ  60
TLSLMSSCCD ESGEVCQIPA TTTQVGSPSC GGGGGDLRSV DSGESSKMPA VKDRRGCYKR  120
KKSTSESWIR VSPTMEDSYA WRKYGQKQIL KAKFPRCYFR CTHKPDQGCL ATKQVQKIQE  180
DPNMYQTKYF GFHTCGALAS RNNIIIDSDD PVEPYLLSFG PMISSGTATQ EDHQHLISSP  240
PVPPIKEEYC KEEETQSNLS GELSAPPVDS SIVWPDLMPL ESSSSTGSQG FDMDFLIDVE  300
PDDLANGFHF EES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-41WRKY family protein