PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077391.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 378aa MW: 42796 Da PI: 5.3171

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.4	3.6e-21	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+ ks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + +gk++vt+++ +HnHela XP_028077391.1 92 FYNAYAKAKGFSIPKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDhvAEKSRAPKALTRVGCKAQFRIRYDVdageEGKYVVTHFVADHNHELA 185 9**************9998.666699999******9988877899999***********9987667799************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MALAEVKSEG DDYDIPNEAD NIRLMNESRT KPYHGCETGP SNEEATNMNV EDGGADVKKE 60 MVDDVYRNDM VGDVECAILE QKFDSVEDRE AFYNAYAKAK GFSIPKSRFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDHVAE KSRAPKALTR VGCKAQFRIR YDVDAGEEGK YVVTHFVADH 180 NHELAEQHCV IYLRSYRSLN SADKAQAMAM RNVGMKTSQI MDYMVNQSGS YENVGFICTD 240 LHNHIQAEHR AEVEDGDAHG ALVYLCAKLD VDVRFFYNYD VCNDNKLQNL FWADSKSRAN 300 YAKFGDVLIF DSTYRTNAYK KPFDILAGVT CHFRTTIFAC VLLANGTNDT YTWVLETFME 360 AMGNKALVSV LTDGDKTM

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MALAEVKSEG DDYDIPNEAD NIRLMNESRT KPYHGCETGP SNEEATNMNV EDGGADVKKE  60
MVDDVYRNDM VGDVECAILE QKFDSVEDRE AFYNAYAKAK GFSIPKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDHVAE KSRAPKALTR VGCKAQFRIR YDVDAGEEGK YVVTHFVADH  180
NHELAEQHCV IYLRSYRSLN SADKAQAMAM RNVGMKTSQI MDYMVNQSGS YENVGFICTD  240
LHNHIQAEHR AEVEDGDAHG ALVYLCAKLD VDVRFFYNYD VCNDNKLQNL FWADSKSRAN  300
YAKFGDVLIF DSTYRTNAYK KPFDILAGVT CHFRTTIFAC VLLANGTNDT YTWVLETFME  360
AMGNKALVSV LTDGDKTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-50	FAR1 family protein