PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077046.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 501aa MW: 58562.4 Da PI: 8.4185

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.1	2.9e-23	36	126	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ + F +r+++ +ks+++g +++r+fvC k+g++e+ek+k ++++ etrt+C+a + v++++ +kw v+k++ +HnH+l XP_028077046.1 36 QFYNEYGRIMRFGIRRDYLNKSRKDGVMINRKFVCCKKGEKEKEKDKqYMIVNHPKHETRTKCNAFMYVSLDRdLSKWIVKKFDDNHNHPL 126 6************************************999988883455677999***********9899***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MENGGHEGCS KDMGELSKYK TPCLGMEFHS EEVAYQFYNE YGRIMRFGIR RDYLNKSRKD 60 GVMINRKFVC CKKGEKEKEK DKQYMIVNHP KHETRTKCNA FMYVSLDRDL SKWIVKKFDD 120 NHNHPLHFPQ YTHLIPSQRK LCQAQALNVH IADDTGKKPT SFFTDQDQAI TKAISEVMPK 180 VFHGLCTFHL MQNALKHLGY LYKSGSKFGS DFKACIFGCE DEHKLIEAWD SLIDKYDLYE 240 NVWMKKTWEK REQWTHVYMK YLFTTGMRST QLSESLNATL KRYLQADHNI VQFFTHFNQI 300 VVDKVLDMSL SCQVKQCHEL EGEVRYMIRL YGDDREYIVE GNMEVNELGG EKNCQKIRCT 360 CQKFENIRIL CGHAIKALDR MNVMEIPERY ILGRWRLDAK SGEIKGGKVE VDENDPKLEI 420 SARYRDLCPR MVKLATQAFV YKPAYQLVDE GIKELCTKVN KMMVSFDDMG DCGSGSNIDM 480 ASNPNFARVK GLKKRWTEGW R

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MENGGHEGCS KDMGELSKYK TPCLGMEFHS EEVAYQFYNE YGRIMRFGIR RDYLNKSRKD  60
GVMINRKFVC CKKGEKEKEK DKQYMIVNHP KHETRTKCNA FMYVSLDRDL SKWIVKKFDD  120
NHNHPLHFPQ YTHLIPSQRK LCQAQALNVH IADDTGKKPT SFFTDQDQAI TKAISEVMPK  180
VFHGLCTFHL MQNALKHLGY LYKSGSKFGS DFKACIFGCE DEHKLIEAWD SLIDKYDLYE  240
NVWMKKTWEK REQWTHVYMK YLFTTGMRST QLSESLNATL KRYLQADHNI VQFFTHFNQI  300
VVDKVLDMSL SCQVKQCHEL EGEVRYMIRL YGDDREYIVE GNMEVNELGG EKNCQKIRCT  360
CQKFENIRIL CGHAIKALDR MNVMEIPERY ILGRWRLDAK SGEIKGGKVE VDENDPKLEI  420
SARYRDLCPR MVKLATQAFV YKPAYQLVDE GIKELCTKVN KMMVSFDDMG DCGSGSNIDM  480
ASNPNFARVK GLKKRWTEGW R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G19990.1	7e-35	FAR1 family protein