PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076682.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 300aa    MW: 32441.9 Da    PI: 8.6087
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.11.5e-1195139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  +   g+W+ I+r + k+Rt+ q+ s+ qky
   XP_028076682.1  95 PWTEEEHRLFLLGLXEVREGDWRGISRNFVKTRTPTQVASHAQKY 139
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MSRGCSHCGN NGHNSLTCSD SSGCAAAVSG GGSNGGIMLF GVRLTEGSFR KSASMNNLAQ  60
YEQPQDSNPD VAAGYASDDV VHASGGSYER KRGVPWTEEE HRLFLLGLXE VREGDWRGIS  120
RNFVKTRTPT QVASHAQKYF LRRCNHNRRR RRSSLFDITT DTCMSSAMEE DRIQQETTSH  180
LKNNLKRFPV STLPATQIPV ALPVAGNNSE DNLRLGDKKE SNLIRPIPVI PVPQSSKMAD  240
LNLNHTPIVV DPLPLTLKLS TSPSSSSSDQ MSPSSRHSSA FQAMSGGFNG SSGDSIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-70MYB_related family protein