PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076486.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 673aa MW: 78330.4 Da PI: 6.5081

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.9	1.2e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk t +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_028076486.1 68 EYYGNFARKNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPARKKPTGENHRDRKSVRCGCDAKMYLSKEVvdgVSQWFVVQFSNVHNHELL 159 59******************8888.***************************************99867789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MVSMPSKSIW MHRQQCPCGD WKCFVTYEGD AEDASVVSKL VKNDNFSIEA MVSPYVGMVF 60 KSDEDAFEYY GNFARKNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAR KKPTGENHRD 120 RKSVRCGCDA KMYLSKEVVD GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIQEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIQGGQLP FMERDVRNFV QNRKKVVQEN EVLLTEKREN 240 DTLELLEVCR ATKEGDPYFV YDVTVDENEK VENIAWSFGD SIHAYTMFGD VVYFDTTYCS 300 ITYGMLFGAW LGIDNHGKTI FFGCALLQDE TVRSFAWALQ TFVHFMKGRC PQTILTDLDP 360 GLRDAIRSEL PNTKHVISIC YILPKLSCWF SLPLGPRYTE FRSEFDVLYH LDSTEDFEFR 420 WNQMVGQYGL SSDKHIALLF SFRTSWALPY KKGCFLARME TTEYSKSVDA FLKGVFSAQT 480 CLRSFLEQVG ISSSLKIQTR EEMQYMHFRT CLPIEEHART ILTPFAFNAL QHELVLAMQY 540 ATSEMTNGSH IVHHFKKIDG ERLVIWIPED EQIHCSCKEF ESSGILCRHA LRVLLMKNYF 600 QLPEKYFPSR WRQEKSLVPC DDQNNQNGND EWFQEFYTLT GTLFTESSIT KERSDYVHRE 660 LTKELTRLIS EWI

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MVSMPSKSIW MHRQQCPCGD WKCFVTYEGD AEDASVVSKL VKNDNFSIEA MVSPYVGMVF  60
KSDEDAFEYY GNFARKNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAR KKPTGENHRD  120
RKSVRCGCDA KMYLSKEVVD GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIQEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIQGGQLP FMERDVRNFV QNRKKVVQEN EVLLTEKREN  240
DTLELLEVCR ATKEGDPYFV YDVTVDENEK VENIAWSFGD SIHAYTMFGD VVYFDTTYCS  300
ITYGMLFGAW LGIDNHGKTI FFGCALLQDE TVRSFAWALQ TFVHFMKGRC PQTILTDLDP  360
GLRDAIRSEL PNTKHVISIC YILPKLSCWF SLPLGPRYTE FRSEFDVLYH LDSTEDFEFR  420
WNQMVGQYGL SSDKHIALLF SFRTSWALPY KKGCFLARME TTEYSKSVDA FLKGVFSAQT  480
CLRSFLEQVG ISSSLKIQTR EEMQYMHFRT CLPIEEHART ILTPFAFNAL QHELVLAMQY  540
ATSEMTNGSH IVHHFKKIDG ERLVIWIPED EQIHCSCKEF ESSGILCRHA LRVLLMKNYF  600
QLPEKYFPSR WRQEKSLVPC DDQNNQNGND EWFQEFYTLT GTLFTESSIT KERSDYVHRE  660
LTKELTRLIS EWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein