PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076449.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 312aa    MW: 34878.4 Da    PI: 9.4921
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind323.85.1e-9913121301
       GAGA_bind   1 mdddgsre..rnkg.yye.........paaslken....lglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdn 79 
                     mdd g+ e   ++  yy+         p++++ke     +++++m++iae++a+++e n a++ek+aa+ er++a +qrd+a+a rn+a+ erd+
  XP_028076449.1   1 MDDGGKPEhgWHRMdYYKgvhtpwnmmPQHQMKEAnaclMNKKIMQIIAEKNAAVEEMNRAITEKNAAIEERNEAVKQRDEAIAARNNAFRERDS 95 
                     777777664423335888888888888444555432333899***************************************************** PP

       GAGA_bind  80 kllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkseks 174
                     +++al ++ens++ +l  g+++ +gtk +++  ++     ++ a++ re ++++++p+ + ++ea ++++ k+ +++k   +k +kk kk +e+ 
  XP_028076449.1  96 AIAALRFQENSMNGTL--GYGIQHGTKRMHHPTNHPAASAAEAAYNRREAQITDTFPMPTIPSEAVNSHQAKRANENKAVSSKVSKKGKKVGEDL 188
                     **********976555..89999*******9999888999********************************99999999999999999999999 PP

       GAGA_bind 175 kkkvkkesaderskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkkl 268
                     +++v++++    skae++ ++l  +n+v++Dest+ +PvCsCtG +rqCYkWGnGGWqS+CCttt+S yPLP+++++r+ R++grKmS+++f++l
  XP_028076449.1 189 NRHVTTDG----SKAEWDAQELgLINEVNFDESTMSPPVCSCTGLPRQCYKWGNGGWQSSCCTTTLSAYPLPQMPNKRHVRMGGRKMSGSVFTRL 279
                     99988888....89********668********************************************************************** PP

       GAGA_bind 269 LekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     L++Laa G+dls p+DLkd+W kHG n+++ti+
  XP_028076449.1 280 LSRLAAGGHDLSIPLDLKDYWSKHGSNRYITIK 312
                     ********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDDGGKPEHG WHRMDYYKGV HTPWNMMPQH QMKEANACLM NKKIMQIIAE KNAAVEEMNR  60
AITEKNAAIE ERNEAVKQRD EAIAARNNAF RERDSAIAAL RFQENSMNGT LGYGIQHGTK  120
RMHHPTNHPA ASAAEAAYNR REAQITDTFP MPTIPSEAVN SHQAKRANEN KAVSSKVSKK  180
GKKVGEDLNR HVTTDGSKAE WDAQELGLIN EVNFDESTMS PPVCSCTGLP RQCYKWGNGG  240
WQSSCCTTTL SAYPLPQMPN KRHVRMGGRK MSGSVFTRLL SRLAAGGHDL SIPLDLKDYW  300
SKHGSNRYIT IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-110BBR-BPC family protein