PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076211.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 264aa    MW: 28323 Da    PI: 6.5212
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.2e-07135161530
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.a 30 
                     h+++Er RR+ri +++  L+el+P+ +
  XP_028076211.1 135 HSIAERLRRERIAERIRALQELVPNvN 161
                     99**********************954 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MANNNPSENS TDDFLEQILG FQTYASADTH LAPNDATLAA TPPPMMLQLS SGGGFHRPVF  60
PLGLSLDQGK PGFMNEASGS SKRFLEDVVD GRSSSSSVKN AFPGQPMPST VAAVPHPPAI  120
RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQELVPNV NKVLSMSRLG GAAAVAPLVT  180
DIPISSLEEE AGEGGRNQPT WEKWSNDGTE RQVAKLMEEN VGAAMQFLQS KALCIMPISL  240
ASAIYHTQPP EATTVVKSEA HPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140145RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-80bHLH family protein