PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074625.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 506aa MW: 55195.7 Da PI: 6.8537

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27	8.2e-09	337	384	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_028074625.1 337 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 384 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MEKEQPFLSE DNTVLPNWNS ASFGIEIQSN ELNCGSEQLP NCFLNPNWEN SMDQSDPFES 60 ALSSMVSSPA ASGADGDGVV IRELIGRLGS ICNSSEISRQ SYITGNNSTN NSCYSTPLNS 120 PPKLNLSMMD HQIRRNSSIP GNHLPFSADP GFVERAARFS CFGSRNLGGL NGQFGLNESE 180 LPHRLTPIME SSKLSRVLFN QAMKVAGSPM GVLGNPKNGE FGNSREGSSV SEQIPDGEIG 240 TKVLSDANAR KRKSIRRGKA KENAPSSPAK DGKVATESDE STAKRTKKDE SSGNEKDIAK 300 PKAEKSENGK AKDSAKPSEP PKDYIHVRAR RGQATDSHSL AERVRREKIS ERMKFLQDLV 360 PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLSTVNPR MDFNMEALVS KDIFQSMPHI 420 IHPLDNTSSP AFPYGYQSLH GPTLHGGLPN GTETSLTMNP LNGAPQSQPT TFWGDDLQSV 480 VQMGFGQNEP QNFHGAMATT QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MEKEQPFLSE DNTVLPNWNS ASFGIEIQSN ELNCGSEQLP NCFLNPNWEN SMDQSDPFES  60
ALSSMVSSPA ASGADGDGVV IRELIGRLGS ICNSSEISRQ SYITGNNSTN NSCYSTPLNS  120
PPKLNLSMMD HQIRRNSSIP GNHLPFSADP GFVERAARFS CFGSRNLGGL NGQFGLNESE  180
LPHRLTPIME SSKLSRVLFN QAMKVAGSPM GVLGNPKNGE FGNSREGSSV SEQIPDGEIG  240
TKVLSDANAR KRKSIRRGKA KENAPSSPAK DGKVATESDE STAKRTKKDE SSGNEKDIAK  300
PKAEKSENGK AKDSAKPSEP PKDYIHVRAR RGQATDSHSL AERVRREKIS ERMKFLQDLV  360
PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLSTVNPR MDFNMEALVS KDIFQSMPHI  420
IHPLDNTSSP AFPYGYQSLH GPTLHGGLPN GTETSLTMNP LNGAPQSQPT TFWGDDLQSV  480
VQMGFGQNEP QNFHGAMATT QMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-95	bHLH family protein