PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028074602.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 528aa MW: 59370.6 Da PI: 6.6486

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028074602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.6	4.4e-18	21	76	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t+ q+e+Le+++ ++yps+e++ +LA++++Lte+qV+ WF+ rR k+kk XP_028074602.1 21 KKRRLKTPFQVEALEKFYSVHKYPSEEMKFQLAESIELTEKQVSGWFCHRRLKDKK 76 89****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MDEESCEVHS EDNKALPEKN KKRRLKTPFQ VEALEKFYSV HKYPSEEMKF QLAESIELTE 60 KQVSGWFCHR RLKDKKSIYV EASANGKQER SSGIVQDRGS GLRQDSCGST KQGDNRHVDP 120 REVESRRCSG QDLSAADLAY EHGRCHNGNY SDVDDTSSES SLPLQHRFHP QNEVPFDIAT 180 SSCLPQNENI APLNSMGIRT RTGPSGYLKV KGQVENAAIT AVKRQLGRHY REDGPPLGVE 240 FDPLPPGAFE SSIKEPDNEP YYLGDPNLLH SPDVPRAHNQ PNSGTRYEVY NCKMSSHNSG 300 LDGTSFKLMH GSDYDESCFG HQSKPKPLLP NHDNPFPSRN SSLGVDESSA REMPVHDGTR 360 MYKMRSKHDV VGRRMDSLSG HNPHPYGRKI AGGQTEPWLC NTDEVSPVDS QREHLESKHS 420 NIKCKHIESL GMEERGLSGR MAKEDKLYGE RRAINEYGNS LRVMGHPTNE TRVAKRDPDE 480 FPVPQQQHAR KTLIAEMPTW TNQIKRSAAE MPSSFSEDET AETSSSLD

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MDEESCEVHS EDNKALPEKN KKRRLKTPFQ VEALEKFYSV HKYPSEEMKF QLAESIELTE  60
KQVSGWFCHR RLKDKKSIYV EASANGKQER SSGIVQDRGS GLRQDSCGST KQGDNRHVDP  120
REVESRRCSG QDLSAADLAY EHGRCHNGNY SDVDDTSSES SLPLQHRFHP QNEVPFDIAT  180
SSCLPQNENI APLNSMGIRT RTGPSGYLKV KGQVENAAIT AVKRQLGRHY REDGPPLGVE  240
FDPLPPGAFE SSIKEPDNEP YYLGDPNLLH SPDVPRAHNQ PNSGTRYEVY NCKMSSHNSG  300
LDGTSFKLMH GSDYDESCFG HQSKPKPLLP NHDNPFPSRN SSLGVDESSA REMPVHDGTR  360
MYKMRSKHDV VGRRMDSLSG HNPHPYGRKI AGGQTEPWLC NTDEVSPVDS QREHLESKHS  420
NIKCKHIESL GMEERGLSGR MAKEDKLYGE RRAINEYGNS LRVMGHPTNE TRVAKRDPDE  480
FPVPQQQHAR KTLIAEMPTW TNQIKRSAAE MPSSFSEDET AETSSSLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	26	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	3e-84	HB-other family protein