PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028074144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 317aa MW: 37061.6 Da PI: 8.3684 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 97.5 | 2e-30 | 8 | 232 | 3 | 235 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +l+ + ea+++g+ +l + +++r+se +sp g m R y+ + ++ +++s + laa+ +f++++P kf+h++ XP_028074144.1 8 HLIKAYREAIDEGQIQLSEVIVKRISEKVSPVGGVMDRFLYYLFQSFDKQADY----------LRQES---NNNFLAAFMTFYQIFPDGKFAHFA 89 666677799***********************************999998876..........33333...56899999**************** PP GRAS 98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl.vakr 185 aN+aIl+a+ ++ e +Hii fd+++G+QWp++++a+ ++++ +lR+T + +e + s + et++ L + A+++ v++ +++ +++ XP_028074144.1 90 ANRAILQAMPHDvELIHIIEFDMGEGIQWPSMIEAIGWQQRKEIRLRLTSGKWSEGDsdcspSPWRFTETRRWLCDHAQAFCVKLTVDTMeLHDL 184 *********9998999*********************************988866557898888899999999****************833334 PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksls 235 ++++++ + + +++E l+ n++l+l ++ +v ++ +++L++ k+l XP_028074144.1 185 VNEMKTMKRNGRRREWLVFNCMLRLPHMG--RVRSRRDLSKFLRVAKELL 232 4444444555555***************8..5555555799***999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MEINNVIHLI KAYREAIDEG QIQLSEVIVK RISEKVSPVG GVMDRFLYYL FQSFDKQADY 60 LRQESNNNFL AAFMTFYQIF PDGKFAHFAA NRAILQAMPH DVELIHIIEF DMGEGIQWPS 120 MIEAIGWQQR KEIRLRLTSG KWSEGDSDCS PSPWRFTETR RWLCDHAQAF CVKLTVDTME 180 LHDLVNEMKT MKRNGRRREW LVFNCMLRLP HMGRVRSRRD LSKFLRVAKE LLAYVTNRNF 240 DRKSFSTQNP IIELDVGSIS CENIVFSFMI RSCARRRTDF DNMGIIAFGD GDVWVNPKIS 300 SSFGSFLDGH LVHYKLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 1e-16 | GRAS family protein |