PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074002.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 305aa    MW: 34177.5 Da    PI: 8.7881
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind323.37.1e-99930527301
       GAGA_bind  27 qlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsg.tksidslqqlse 116
                       m+++aerda+ir+rn+al e++ a+aerdma lqrd+a+aern a+ erd+ l+al+++e s++    s +++g +vl+g +k+++++qq+++
  XP_028074002.1   9 TYMAIMAERDAAIRDRNMALDERRRAIAERDMAMLQRDAAIAERNSAIDERDKVLAALQFRESSMNenniSPDSPGNGVLRGgAKHLHHHQQMHH 103
                     469************************************************************99988766667788888852799999999898 PP

       GAGA_bind 117 ..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader.................skaekk 192
                        ql+++ ++ r+  +++ ++ ++ +   ++++k++k ++ak++k+kk +k  +k++  ++ v+++ ++++                  +    
  XP_028074002.1 104 svAQLAETEYDPRKIPTSNPYQ-ST-EVACETTTKPRKVKQAKETKTKKPSKSPRKGKRGHEGVSQAAMSTSngweneddlvgededldGRLVMW 196
                     8999999999966655444443.33.33334444444455555555555555444455555555554444224777899*********9555555 PP

       GAGA_bind 193 sidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287
                     + +l+ n+v++Dest+PvPvCsCtG ++ CYkWG+GGWqSaCCttt+S+yPLP+++++r+aRi+grKmS++af+klL++LaaeG+dl +p+DLkd
  XP_028074002.1 197 KDNLGSNQVNFDESTMPVPVCSCTGLPQPCYKWGSGGWQSACCTTTMSMYPLPQMSNKRHARIGGRKMSGSAFTKLLNRLAAEGHDLFTPLDLKD 291
                     569******************************************************************************************** PP

       GAGA_bind 288 hWAkHGtnkfvtir 301
                     hWAkHGtn++ t++
  XP_028074002.1 292 HWAKHGTNRYNTVK 305
                     ***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEHNLTIKTY MAIMAERDAA IRDRNMALDE RRRAIAERDM AMLQRDAAIA ERNSAIDERD  60
KVLAALQFRE SSMNENNISP DSPGNGVLRG GAKHLHHHQQ MHHSVAQLAE TEYDPRKIPT  120
SNPYQSTEVA CETTTKPRKV KQAKETKTKK PSKSPRKGKR GHEGVSQAAM STSNGWENED  180
DLVGEDEDLD GRLVMWKDNL GSNQVNFDES TMPVPVCSCT GLPQPCYKWG SGGWQSACCT  240
TTMSMYPLPQ MSNKRHARIG GRKMSGSAFT KLLNRLAAEG HDLFTPLDLK DHWAKHGTNR  300
YNTVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.12e-90BBR-BPC family protein