PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073887.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 565aa MW: 65494.5 Da PI: 7.5396

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34.6	6.3e-11	25	71	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +fYn+Y+ ++ Fs+r+++ +k k +++ ++r +vC+keg+r++++++ XP_028073887.1 25 DFYNTYGGRMRFSIRRDYCRKDKFTNQLICRLLVCNKEGFRKRKHNH 71 6*****************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MEPENDCDWK PKQGMTFDSE QCTYDFYNTY GGRMRFSIRR DYCRKDKFTN QLICRLLVCN 60 KEGFRKRKHN HDLVSPECAH MLPSQRKIST TQAIQLDLAA QSGLRFGQSF ELMGREAGGR 120 QYLGFTKLDS KNYLRTKRQQ SLVYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEQITNMF 180 WADAQMIMDY AQFGDVVTFD TTYKLNKEHR PFASFMGFNH HRETIIFGAA LLYDETAESF 240 VWLFENFLEA MSRKAPKTLF TDQDAAMAKA IPIVMPDTSH RLCIWHLMQN ALKHVNCLFQ 300 DKGVKSVLNK FFFHIKDANQ WKLEWAEMLD KYDAHENHWL KLTFADHIRS DFNLNEFFMH 360 FERYFQSIES DIEAIEYGEA STIYTVVDVG NKYARKVKIE RDGSLGCNCT KFEREGILCY 420 HSLKVIRDIL KMKEVPPQYI LKRWTKQARA ETVKDIKGND IEVDVKFQQA SRYKTLMTAF 480 RALASRAAET EETFDFCVAQ LATLGANVEG KLSAHFGVGN EVGNDDDTQT FEVDCEDVNH 540 VVQPKGLKKK VATSKVKGGS KVDSK

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MEPENDCDWK PKQGMTFDSE QCTYDFYNTY GGRMRFSIRR DYCRKDKFTN QLICRLLVCN  60
KEGFRKRKHN HDLVSPECAH MLPSQRKIST TQAIQLDLAA QSGLRFGQSF ELMGREAGGR  120
QYLGFTKLDS KNYLRTKRQQ SLVYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEQITNMF  180
WADAQMIMDY AQFGDVVTFD TTYKLNKEHR PFASFMGFNH HRETIIFGAA LLYDETAESF  240
VWLFENFLEA MSRKAPKTLF TDQDAAMAKA IPIVMPDTSH RLCIWHLMQN ALKHVNCLFQ  300
DKGVKSVLNK FFFHIKDANQ WKLEWAEMLD KYDAHENHWL KLTFADHIRS DFNLNEFFMH  360
FERYFQSIES DIEAIEYGEA STIYTVVDVG NKYARKVKIE RDGSLGCNCT KFEREGILCY  420
HSLKVIRDIL KMKEVPPQYI LKRWTKQARA ETVKDIKGND IEVDVKFQQA SRYKTLMTAF  480
RALASRAAET EETFDFCVAQ LATLGANVEG KLSAHFGVGN EVGNDDDTQT FEVDCEDVNH  540
VVQPKGLKKK VATSKVKGGS KVDSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-81	FAR1 family protein