PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073651.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 336aa    MW: 37322.2 Da    PI: 6.928
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP108.78.7e-3423172289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................... 65 
                     +g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l +                                
  XP_028073651.1  23 TGRKDRHSKVVTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKNAIDKLSEIppwnpidsttvmpppppppppnvdpnaeime 117
                     79************************************************************999999999999888887776665555543333 PP

             TCP  66 .............ssssaseceaesssssasnsssg.................................k 89 
                                  s                +++s++                                  
  XP_028073651.1 118 ssscgygfhhlpqS---------------MDTQSIAiaddadtmksffpvsssetssmnfqgyphedlcL 172
                     33333333222220...............22223334344333334444433222222333333443441 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MIMKNSGGGE IVQVQGGHIL RSTGRKDRHS KVVTSKGPRD RRVRLSAHTA IQFYDVQDRL  60
GYDRPSKAVD WLMKKAKNAI DKLSEIPPWN PIDSTTVMPP PPPPPPPNVD PNAEIMESSS  120
CGYGFHHLPQ SMDTQSIAIA DDADTMKSFF PVSSSETSSM NFQGYPHEDL CLSLHSLQDP  180
SSSHHHTTAD STDHHHHHHQ TLFPVGFEAN YSRLVSWNGG GNGENREGYM FSSSQAMSMP  240
FQPPQPFFCQ SSVLSSQRGP LQSSFLPTVH APWNEDHPIH SNLHHNTRQP IQQSSISTTQ  300
FASSHEALLQ FHNEEEHHGL VLSNKPSSSA SPNSHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.25e-49TCP family protein