PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073187.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 554aa MW: 60552.4 Da PI: 5.2273

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	8.1e-12	371	413	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL AveY+k+L XP_028073187.1 371 MAERRRRKKLNDRLYLLRSVVPKiS------KMDRASILGDAVEYLKEL 413 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MLPRINNTLA WMEHRGDEET PSWAQNNNNN NNNCFVEHKD EMGSLSTFKS MLGVEDVEEE 60 WYITNNNIQN QNHHPITFPT NFTDADNNNN NNNNNHNMLL QPVDSSSSCS PSSASAFTNL 120 DPSQLQYFLP PKPTSMPSLF NLMPSNLIDN SFDMGFLDTH QGLSSFNRGG GGVLTGFTDL 180 SSQIHMATPN LVSDPQFSTT HLLQLAQNNS TVGAGAGVDF GFRGFEEASG NSLFLNRSKL 240 LKPLDNFASV GAQPTLFQKR AALRKSLTNN GASLGVLGIE GCGIGSNGEG YNGQMELSNV 300 NEKKRMNINE DDFEDVSIDG SGLNYDSDDF MENNKVEESG KNGGNSSNAN SAVTGGDQKG 360 KKKGLPAKNL MAERRRRKKL NDRLYLLRSV VPKISKMDRA SILGDAVEYL KELLQKISDL 420 HNELESNPPG SSLTPTATSF YPLTPTPHSL TSRIKEELCP GSLPSPNGQP ARVEVRLREG 480 RAVNIHMFCS RKPGLLLSTM GALDNLGLDI QQAVISCFNG FALDIFRAEQ CREGQDLHPD 540 QIKAVLLDSA GFLA

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MLPRINNTLA WMEHRGDEET PSWAQNNNNN NNNCFVEHKD EMGSLSTFKS MLGVEDVEEE  60
WYITNNNIQN QNHHPITFPT NFTDADNNNN NNNNNHNMLL QPVDSSSSCS PSSASAFTNL  120
DPSQLQYFLP PKPTSMPSLF NLMPSNLIDN SFDMGFLDTH QGLSSFNRGG GGVLTGFTDL  180
SSQIHMATPN LVSDPQFSTT HLLQLAQNNS TVGAGAGVDF GFRGFEEASG NSLFLNRSKL  240
LKPLDNFASV GAQPTLFQKR AALRKSLTNN GASLGVLGIE GCGIGSNGEG YNGQMELSNV  300
NEKKRMNINE DDFEDVSIDG SGLNYDSDDF MENNKVEESG KNGGNSSNAN SAVTGGDQKG  360
KKKGLPAKNL MAERRRRKKL NDRLYLLRSV VPKISKMDRA SILGDAVEYL KELLQKISDL  420
HNELESNPPG SSLTPTATSF YPLTPTPHSL TSRIKEELCP GSLPSPNGQP ARVEVRLREG  480
RAVNIHMFCS RKPGLLLSTM GALDNLGLDI QQAVISCFNG FALDIFRAEQ CREGQDLHPD  540
QIKAVLLDSA GFLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	361	379	KKKGLPAKNLMAERRRRKK
2	373	380	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-130	bHLH family protein