PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072876.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 354aa    MW: 38573 Da    PI: 6.894
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-27103185271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_028072876.1 103 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgngltspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 185
                     689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MVSGGGGRGG GNNQQEGEKN PSVVSRGGGT RSWGTTVSGQ SVSTSGSVGS PSSRSEAAMA  60
TPASDTTFFR LNHLDIDADD TGSQGAAGKK KKRGQRAVGG DKSGRGLRQF SMKVCEKVES  120
KGRTTYNEVA DELVAEFADP GNGLTSPDQQ QYDEKNIRRR VYDALNVLMA MDIISKDKKE  180
IQWKGLPRTS LNDIELLKTE RLGLRSKIDK KAAYMQELEE QFIGLQNLIQ RNEQLYSSGN  240
SPSGGVALPF ILVQTRPHAT VEVEISEDMQ LVHFDFNSTP FELHDDNYVL KAMKFCERPQ  300
GDEVAPNFST DGGEGSSMSF HTQITQPARS NVPDRPLTSP PLPGILKARV KHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-133E2F/DP family protein