PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072777.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 269aa    MW: 29692.8 Da    PI: 5.6358
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.5e-3076134259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v++tY+ eHnh 
  XP_028072777.1  76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSHVDPTMVVVTYSCEHNHA 134
                     69*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEGRFSNHPF INEQEDIENS PENSEDTLRS GMLNDTKTTS TSSPKRSRRA AQKRVVSIPI  60
GDIEGSRLKG ESAPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSHVDP  120
TMVVVTYSCE HNHALPASKN NHHQNHQQPT IISATTPAAA EAATPVSPPL LFDNLGEEES  180
QINAYQFEWF SHLESVSSTV LESPMLDSGG GGSGGDGALI FTIREEDESL FGDLGELPEC  240
AVVFRRGVRE REEEERRRCN LAPWCGTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.18e-67WRKY family protein