PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028071453.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 661aa MW: 76148.6 Da PI: 9.6104

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028071453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.3	2.1e-07	33	111	13	88
FAR1 13 svrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 +++++s + ++ k + C ++g+ + +kk +++++rt+ ++++gC ++ ++ + +++w +t + + HnH+ XP_028071453.1 33 VIVIKTSDYG-GGKKRPKMYLACERSGQYRVKKKLkhdDNNTSRTTGTKKCGCPFDMRAHRFTtNDEWTLTVVYELHNHP 111 5555555554.33445567789***988877765667888889999********9999*************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MQEYESTQGS QVFKSKDELL NWVREVGKRN GLVIVIKTSD YGGGKKRPKM YLACERSGQY 60 RVKKKLKHDD NNTSRTTGTK KCGCPFDMRA HRFTTNDEWT LTVVYELHNH PPAEHLEGHS 120 YAGRLSKDEK ALLIDMSKSM VRPKEILVTL KQRDAPIYNV RHRNRVIQRV GRLQIQHLLG 180 ELAKYNYIEL HRCEESTMTV TDLFWAHSTS LDLFLFFPDE RLKSLLTEFS SYPDAVNYVI 240 DTWLVPYKEK FVAAWTDTCM YCGNVTTNLV ESAHAKLKRQ LGSCQISFQA SFEKIHSLLE 300 FQHIDIKASF EKSLTVVQHQ FKPSQFRELQ GNMSIFALEY LLVESKRANS ISIHVEACGC 360 VLHHTYGLPC AYEIADYIRQ YRPIPLATIH SQWRQLHISI CKKEEETEMS CHAQVELFVN 420 KFNESDRTMR LELLKKLKNI VYSGSTFFVE PEVKPKTRHR DHKKINVSTR HDPCAFEFVQ 480 SGHDSFSPRD TQITTLASTL QTKKKRPVKG KEKVNPKGKA YITRTVKPGA YVDAFLTGLK 540 PYIKFVKDQH GPEIVSLFLC VSAHRSIVCM DGAIAWVFNS ETAFRPVNRA FSLDSKALMS 600 RIKFLALFSP TTNKDQCSSK RSGSVLHMHV RLAHPIIQAG YEDEIRHPHR LYQAIEAMRM 660 S

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MQEYESTQGS QVFKSKDELL NWVREVGKRN GLVIVIKTSD YGGGKKRPKM YLACERSGQY  60
RVKKKLKHDD NNTSRTTGTK KCGCPFDMRA HRFTTNDEWT LTVVYELHNH PPAEHLEGHS  120
YAGRLSKDEK ALLIDMSKSM VRPKEILVTL KQRDAPIYNV RHRNRVIQRV GRLQIQHLLG  180
ELAKYNYIEL HRCEESTMTV TDLFWAHSTS LDLFLFFPDE RLKSLLTEFS SYPDAVNYVI  240
DTWLVPYKEK FVAAWTDTCM YCGNVTTNLV ESAHAKLKRQ LGSCQISFQA SFEKIHSLLE  300
FQHIDIKASF EKSLTVVQHQ FKPSQFRELQ GNMSIFALEY LLVESKRANS ISIHVEACGC  360
VLHHTYGLPC AYEIADYIRQ YRPIPLATIH SQWRQLHISI CKKEEETEMS CHAQVELFVN  420
KFNESDRTMR LELLKKLKNI VYSGSTFFVE PEVKPKTRHR DHKKINVSTR HDPCAFEFVQ  480
SGHDSFSPRD TQITTLASTL QTKKKRPVKG KEKVNPKGKA YITRTVKPGA YVDAFLTGLK  540
PYIKFVKDQH GPEIVSLFLC VSAHRSIVCM DGAIAWVFNS ETAFRPVNRA FSLDSKALMS  600
RIKFLALFSP TTNKDQCSSK RSGSVLHMHV RLAHPIIQAG YEDEIRHPHR LYQAIEAMRM  660
S