PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070446.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 496aa MW: 57820.3 Da PI: 6.2706

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	100	189	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YAk GFs+r+++ +k k+n +++r +vCskeg+r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++ XP_028070446.1 100 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRSWVCSKEGYRQSKYLEvEERKREPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSM 189 5******************96666.9***********998867888899************999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MAFIITSGLQ MYIASVLYGL KDTSMDISLL MEDNTEQNKN NIIYELVDDD GNDGEYNIHN 60 EDNMVNSNNI PTERDIKRLD EFTENDVFEM TFDSEENGER FYNSYAKVKG FSIRRDQLYK 120 DKNNMVISRS WVCSKEGYRQ SKYLEVEERK REPKQLTRVG CRACFRIKYN RSTSKYEVNE 180 FFKEHNHSMI GPLGVQFLRS HRNVTSADKA QGNAMHHIGM RTSHIMDFAA QQAGGYENVG 240 FIQKDMYNHF GTERRVQVVD GDAEGALAYL CGKEEQDPMF YYKYDVDEEN RLNNLFWTDG 300 GSRTDYLYFG DVLMFDTTYR TNAYNKPFVI LQGVSNHFQT TVFGCALLAS ETVETYIWVS 360 EKFLDAMDHK IPLSVITDGD KAMCRAIKTV MPTARHRLCK WHLKMNALSN IHIEGFLHSF 420 EKCMSMQCTQ EMFELEWKNL VDKYGLHNNK WIADVYCKCT LWAEAYLHGH FFAGAKSTQR 480 CESMNAFFNR FLKVQI

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MAFIITSGLQ MYIASVLYGL KDTSMDISLL MEDNTEQNKN NIIYELVDDD GNDGEYNIHN  60
EDNMVNSNNI PTERDIKRLD EFTENDVFEM TFDSEENGER FYNSYAKVKG FSIRRDQLYK  120
DKNNMVISRS WVCSKEGYRQ SKYLEVEERK REPKQLTRVG CRACFRIKYN RSTSKYEVNE  180
FFKEHNHSMI GPLGVQFLRS HRNVTSADKA QGNAMHHIGM RTSHIMDFAA QQAGGYENVG  240
FIQKDMYNHF GTERRVQVVD GDAEGALAYL CGKEEQDPMF YYKYDVDEEN RLNNLFWTDG  300
GSRTDYLYFG DVLMFDTTYR TNAYNKPFVI LQGVSNHFQT TVFGCALLAS ETVETYIWVS  360
EKFLDAMDHK IPLSVITDGD KAMCRAIKTV MPTARHRLCK WHLKMNALSN IHIEGFLHSF  420
EKCMSMQCTQ EMFELEWKNL VDKYGLHNNK WIADVYCKCT LWAEAYLHGH FFAGAKSTQR  480
CESMNAFFNR FLKVQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-86	FAR1 family protein