PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070192.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 695aa MW: 75598.2 Da PI: 5.1147

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.4	2.2e-16	483	520	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_028070192.1 483 CKRCNCKKSKCLKLYCECFAAGVYCVEPCSCQDCFNKP 520 89**********************************96 PP
2	TCR	51.3	2.3e-16	567	605	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN XP_028070192.1 567 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 605 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MGEEGKKLDR ECESEACGGE GPAMDTPNRN QITTPVSQFE DSPVFNYINS LSPIKTVKSV 60 RISQMFNSFS FTSVPSIFTS PHVNSLKESR FLRRHNFSDP SKPEFSSENG NKIGGNEGVM 120 DVHKSDEQQN FDPDSCIGEA SVEPTYECSK IAIEVSQTLS YDHGSPDCGT MPCRGNETKC 180 VSELAGTSGS VVPFVSKTGF LGSGVHLEGI RNIDQNNEGL ECAWESLTSD AADLLVFDSP 240 SDTEAFAGPF QKLQDSRMNL CTSLVSEFTH VEIKNTQALG SVGFEQCESE NPPSQVGEDS 300 HLKEIEATGE PSEQIDNEPI STLNRGMRRR CLVFEMVGAR RKHLDDNSSS SSSMLSQSDV 360 NIESNDKQLV PTKLGHDSSR CILPGIGLHL NALARTSKDY NIVSHETLAS GAQFIHDPAG 420 QEPINKYLAM ISVERNTGPT ENGVPGMEDV SQASGYIASE EFSQSSPKKK RRRLENAGES 480 EGCKRCNCKK SKCLKLYCEC FAAGVYCVEP CSCQDCFNKP IHEATVLGTR KQIESRNPLA 540 FAPKVIKSSD SVPEIGDESS KTPASARHKR GCNCKKSGCL KKYCECYQGG VGCSINCRCE 600 GCKNAFGRKD GSTLIGADAE VEEEEEETEA CEKSVVDKSL QKNVIQNIIE RNSDSTLPAT 660 PSRALVQQPF SIKSKPPRSS FLSIGSSSGF CGNQR

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MGEEGKKLDR ECESEACGGE GPAMDTPNRN QITTPVSQFE DSPVFNYINS LSPIKTVKSV  60
RISQMFNSFS FTSVPSIFTS PHVNSLKESR FLRRHNFSDP SKPEFSSENG NKIGGNEGVM  120
DVHKSDEQQN FDPDSCIGEA SVEPTYECSK IAIEVSQTLS YDHGSPDCGT MPCRGNETKC  180
VSELAGTSGS VVPFVSKTGF LGSGVHLEGI RNIDQNNEGL ECAWESLTSD AADLLVFDSP  240
SDTEAFAGPF QKLQDSRMNL CTSLVSEFTH VEIKNTQALG SVGFEQCESE NPPSQVGEDS  300
HLKEIEATGE PSEQIDNEPI STLNRGMRRR CLVFEMVGAR RKHLDDNSSS SSSMLSQSDV  360
NIESNDKQLV PTKLGHDSSR CILPGIGLHL NALARTSKDY NIVSHETLAS GAQFIHDPAG  420
QEPINKYLAM ISVERNTGPT ENGVPGMEDV SQASGYIASE EFSQSSPKKK RRRLENAGES  480
EGCKRCNCKK SKCLKLYCEC FAAGVYCVEP CSCQDCFNKP IHEATVLGTR KQIESRNPLA  540
FAPKVIKSSD SVPEIGDESS KTPASARHKR GCNCKKSGCL KKYCECYQGG VGCSINCRCE  600
GCKNAFGRKD GSTLIGADAE VEEEEEETEA CEKSVVDKSL QKNVIQNIIE RNSDSTLPAT  660
PSRALVQQPF SIKSKPPRSS FLSIGSSSGF CGNQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	467	474	PKKKRRRL
2	468	473	KKKRRR
3	470	474	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-143	CPP family protein