PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069875.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 309aa    MW: 33360.2 Da    PI: 4.3826
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.8e-05284306223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+k+F++   L++H +  H
  XP_028069875.1 284 SCKSCSKTFNSDNALQSHTKAkH 306
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEFWGVEVKA GQPLKVTPQL GKVIHISQGA LGEGKKEKGN DLIPLRVKIN GEKFVVGSLS  60
AENFPQVAFD LVFEKDFELS HDWKNGSVYF CGYSADNPFV DDDEFESDDS SDDEDIPLPL  120
TENGKIESKV EEVKPDASKG KTAKPESSAK PKVTVVEPKK DDESDDDDSD DSFEDDSDDE  180
DMMGASDDIG DSDDDDTEDD DSEDEDDETP KKAGPAKKRA TESATKTPVP AKKAKLDTPQ  240
KTGGKKGGGH TATPHPSKQV GKTNATANSN KSNEKSPKSE AKVSCKSCSK TFNSDNALQS  300
HTKAKHDGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243249GGKKGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.21e-35C2H2 family protein