PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028069804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HB-other | ||||||||
Protein Properties | Length: 111aa MW: 13159.1 Da PI: 9.3093 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.7 | 3.5e-17 | 25 | 83 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t eq+e+Le++++++++ps +r++L + + +++ + +kvWFqN R +ek+ XP_028069804.1 25 KYVRYTGEQVEALERVYAECPKPSSLRRQQLIRDCpilsNIEPKHIKVWFQNCRCREKQ 83 6789*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MAMAVAHQHR ESSSDSMNRH LDAEKYVRYT GEQVEALERV YAECPKPSSL RRQQLIRDCP 60 ILSNIEPKHI KVWFQNCRCR EKQQKEASRL QTVNKKMTVM NKLLMEENDR L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 2e-57 | HD-ZIP family protein |