PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069787.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 577aa MW: 67039.3 Da PI: 7.1334

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.7	2e-23	43	133	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs++k + +k+k+++eit+rtfvC+keg+r +k++ + +r+e r+gC+a++ +k+++ gk++ ++++++HnH+l+p XP_028069787.1 43 DFYNTYGGKVGFSIKKLYAHKNKHTKEITSRTFVCYKEGTRGIDKRD-PLVKFPRQEVRCGCRARFSIKLDRnLGKYVAIDFVEHHNHDLVP 133 6*****************************************999.88999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MAEGRESGCD EVIEENNVVN ELANYGWKPK LGMSFDSEQA AYDFYNTYGG KVGFSIKKLY 60 AHKNKHTKEI TSRTFVCYKE GTRGIDKRDP LVKFPRQEVR CGCRARFSIK LDRNLGKYVA 120 IDFVEHHNHD LVPQECIHML PSQRKISTTQ AIEVELAAES GIPLRSAYEL FGRESGGRAS 180 LGFTKLDQKN YLRSKRQKDL EYGEAGSVLQ YFRKKSLENP SFYYAVQLDC EEQISNIFWA 240 DAQMIMDYAQ FGDVVTFDTT YKLNNEHRPF GTFVGFNHHR ETVVFGAALM YDETAESFTW 300 LFQIFLEHVS SLFQDGGVKG VFSKFMHQID DEEEFKIQWD QMLDRYDAHN NHWLAQTFGV 360 KEKWGCPYIM NSWAAGMSTT QLSESFNGFL NDYLNCDHNL MEFFKHFERV LHDKRYKELE 420 AEYNLCQKLP RVSIPTVMLK QMADIYTKII FEEFQNEYVQ SIEASIVGTI HDGESTIFTI 480 QTDVDGKKDK NMTMDRDGFL SCSCKKFEVK GIVCQHCLKV LREIINAKDL PAQYILKRWT 540 KKARAETVKD RRGYDVKQLE PPKVKKLIIC HLQKVKN

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MAEGRESGCD EVIEENNVVN ELANYGWKPK LGMSFDSEQA AYDFYNTYGG KVGFSIKKLY  60
AHKNKHTKEI TSRTFVCYKE GTRGIDKRDP LVKFPRQEVR CGCRARFSIK LDRNLGKYVA  120
IDFVEHHNHD LVPQECIHML PSQRKISTTQ AIEVELAAES GIPLRSAYEL FGRESGGRAS  180
LGFTKLDQKN YLRSKRQKDL EYGEAGSVLQ YFRKKSLENP SFYYAVQLDC EEQISNIFWA  240
DAQMIMDYAQ FGDVVTFDTT YKLNNEHRPF GTFVGFNHHR ETVVFGAALM YDETAESFTW  300
LFQIFLEHVS SLFQDGGVKG VFSKFMHQID DEEEFKIQWD QMLDRYDAHN NHWLAQTFGV  360
KEKWGCPYIM NSWAAGMSTT QLSESFNGFL NDYLNCDHNL MEFFKHFERV LHDKRYKELE  420
AEYNLCQKLP RVSIPTVMLK QMADIYTKII FEEFQNEYVQ SIEASIVGTI HDGESTIFTI  480
QTDVDGKKDK NMTMDRDGFL SCSCKKFEVK GIVCQHCLKV LREIINAKDL PAQYILKRWT  540
KKARAETVKD RRGYDVKQLE PPKVKKLIIC HLQKVKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-109	FAR1 family protein