PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068546.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 344aa MW: 37110.9 Da PI: 6.8935

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	135.2	5.9e-42	44	185	2	130
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s ++s+s+ s++ XP_028068546.1 44 PPKRTTTKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRNSGSTLSAPsrfnssn 138 689******************************************************************99987778888888555556666666 PP TCP 89 ...........kaaksaakskksqksaasalnlakesrakarararertrekm 130 ++++s++ ++++++++ +e + +r+ra er +e+m XP_028068546.1 139 fsipyrrsffpESSPSTTLLSFQTTHQE------AEAESMERKRAAERHHEQM 185 7777755554433333332222222222......2333445555556666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MDFPFQLLEK KEEEEESPCS TSANPSPPIA TVSAAGETSK KPTPPKRTTT KDRHTKVDGR 60 GRRIRMPAVC AARVFQLTRE LGHKSDGETI EWLLQQAEPS VIAATGTGTI PANFTSLNIS 120 LRNSGSTLSA PSRFNSSNFS IPYRRSFFPE SSPSTTLLSF QTTHQEAEAE SMERKRAAER 180 HHEQMGGGYL LQSTTAAAAG VAPPVSQSSI PANFWMVANN SSNNQVMSGG GGGDPIWTFP 240 SVNNSGLYRG GTMSSGLHFM NFPTPMALLP THQLRGGGGV DSSSGNSDGN GGHMTDGYLG 300 MLAGLNPYSY PYSYRSYDIS ESQISESHLH HENDDRHNTT SHHS

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MDFPFQLLEK KEEEEESPCS TSANPSPPIA TVSAAGETSK KPTPPKRTTT KDRHTKVDGR  60
GRRIRMPAVC AARVFQLTRE LGHKSDGETI EWLLQQAEPS VIAATGTGTI PANFTSLNIS  120
LRNSGSTLSA PSRFNSSNFS IPYRRSFFPE SSPSTTLLSF QTTHQEAEAE SMERKRAAER  180
HHEQMGGGYL LQSTTAAAAG VAPPVSQSSI PANFWMVANN SSNNQVMSGG GGGDPIWTFP  240
SVNNSGLYRG GTMSSGLHFM NFPTPMALLP THQLRGGGGV DSSSGNSDGN GGHMTDGYLG  300
MLAGLNPYSY PYSYRSYDIS ESQISESHLH HENDDRHNTT SHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	4e-50	TCP family protein