PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067716.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 298aa    MW: 32602.3 Da    PI: 10.2098
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind319.41.1e-9712981301
       GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.rernlalsekk.aavaerd...................maflqrdkalaernka 73 
                     md +gs++ +n+g+yep ++lk++lglqlms+ ae+     r++ + +++ + +a+++                     m++  rd ++++    
  XP_028067716.1   1 MDGNGSMNiQNWGFYEPPTALKSHLGLQLMSTGAEKPLLGgRSHPAVMATANgGAFHHMPtntgpfnprvcgvsespmpMDY-IRDVWINQ---- 90 
                     999******************************9988766444444444444145666559999******************.9*******.... PP

       GAGA_bind  74 lverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkk 168
                         ++k+l+ l+ ++       ++ +vl++t+  +++q+    q +ds+ +    e  ++ ++ee+  + +     kkr+ +k++k++k+kk+k
  XP_028067716.1  91 ----REKYLNALPGNHH-----HSNFNVLPETSGGQHMQM---LQPTDSPKD----E--SVAQMEETSAKRDSGGPLKKRAGNKTEKSPKTKKAK 167
                     ....6788888886664.....35689*************...333444433....3..333344455555566666667777777778888888 PP

       GAGA_bind 169 kksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqg 263
                     k + +++++ + +   +r++a+kks+++v+ngv++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmS g
  XP_028067716.1 168 KAPISPRDECSVSV--QRARAPKKSMEIVVNGVDMDISGIPIPVCSCTGTPQQCYRWGSGGWQSACCTTSMSMYPLPMSTKRRGARIAGRKMSLG 260
                     87777777766666..79***************************************************************************** PP

       GAGA_bind 264 afkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     afkk+LekL+++Gy++sn++DL++hWAkHGtnkfvtir
  XP_028067716.1 261 AFKKVLEKLSSDGYNFSNAIDLRTHWAKHGTNKFVTIR 298
                     *************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDGNGSMNIQ NWGFYEPPTA LKSHLGLQLM STGAEKPLLG GRSHPAVMAT ANGGAFHHMP  60
TNTGPFNPRV CGVSESPMPM DYIRDVWINQ REKYLNALPG NHHHSNFNVL PETSGGQHMQ  120
MLQPTDSPKD ESVAQMEETS AKRDSGGPLK KRAGNKTEKS PKTKKAKKAP ISPRDECSVS  180
VQRARAPKKS MEIVVNGVDM DISGIPIPVC SCTGTPQQCY RWGSGGWQSA CCTTSMSMYP  240
LPMSTKRRGA RIAGRKMSLG AFKKVLEKLS SDGYNFSNAI DLRTHWAKHG TNKFVTIR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151165KRAGNKTEKSPKTKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.14e-87BBR-BPC family protein