PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066844.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 677aa MW: 76912.8 Da PI: 6.0818

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.2	2.6e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_028066844.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g +tdWvmheyrl XP_028066844.1 100 S-QMRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECET PSGLQDAYAL CRVFKKSATG PKIGEHYVGS GSNNNQMSSD 180 HSSSMNDLYS EGRGEDLESY DYNQMALHHS TSSPNMNIHV GSPTVNTNTS SAATDGNWMR 240 YLSEDAFSFT NPSFSNCGNI SYPPSKVDIA LECARLQHRL SMPPLEVHDF PQGGFVDLRI 300 PQSDSIRSHN PNDHEEHDIL QEILSVAQAS QELINQDMTW GVTSGGGSFY AQQAGDDFSF 360 HPHAVQIHDM MNNGGGGGSS RLIMEDQQHT ISRSIEIGGF DKDFKTERTV ENLRWVGMSS 420 KDLEKNFSED YKTVPIETIS CFQTSEDQEV RGEIDHQSNF NEFNDREAND FPFGFTDDNL 480 NDNFLDDSHE VDDFSSTPNF EVHEKIEVSH GLFVSTRQVA ETFFHQIVPS EIVKVYLNPV 540 ITTHHSPMTK PDSTTKPKKP WRKIVSPSIT IIALLLTYYC VYFGEHLEDE KLRDSFVDNT 600 SKGVKRREKD CSNDDEVNKM KKHGGTLMWK NYKKRNWFVG SIGGSICSMV LNQVWPYLTI 660 ALALCSIWVH HIAPNSP

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECET PSGLQDAYAL CRVFKKSATG PKIGEHYVGS GSNNNQMSSD  180
HSSSMNDLYS EGRGEDLESY DYNQMALHHS TSSPNMNIHV GSPTVNTNTS SAATDGNWMR  240
YLSEDAFSFT NPSFSNCGNI SYPPSKVDIA LECARLQHRL SMPPLEVHDF PQGGFVDLRI  300
PQSDSIRSHN PNDHEEHDIL QEILSVAQAS QELINQDMTW GVTSGGGSFY AQQAGDDFSF  360
HPHAVQIHDM MNNGGGGGSS RLIMEDQQHT ISRSIEIGGF DKDFKTERTV ENLRWVGMSS  420
KDLEKNFSED YKTVPIETIS CFQTSEDQEV RGEIDHQSNF NEFNDREAND FPFGFTDDNL  480
NDNFLDDSHE VDDFSSTPNF EVHEKIEVSH GLFVSTRQVA ETFFHQIVPS EIVKVYLNPV  540
ITTHHSPMTK PDSTTKPKKP WRKIVSPSIT IIALLLTYYC VYFGEHLEDE KLRDSFVDNT  600
SKGVKRREKD CSNDDEVNKM KKHGGTLMWK NYKKRNWFVG SIGGSICSMV LNQVWPYLTI  660
ALALCSIWVH HIAPNSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-164	NAC family protein