PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066843.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 679aa MW: 77140 Da PI: 6.0818

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.2	2.6e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_028066843.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g +tdWvmheyrl XP_028066843.1 100 S-QMRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECET PSGLQVQDAY ALCRVFKKSA TGPKIGEHYV GSGSNNNQMS 180 SDHSSSMNDL YSEGRGEDLE SYDYNQMALH HSTSSPNMNI HVGSPTVNTN TSSAATDGNW 240 MRYLSEDAFS FTNPSFSNCG NISYPPSKVD IALECARLQH RLSMPPLEVH DFPQGGFVDL 300 RIPQSDSIRS HNPNDHEEHD ILQEILSVAQ ASQELINQDM TWGVTSGGGS FYAQQAGDDF 360 SFHPHAVQIH DMMNNGGGGG SSRLIMEDQQ HTISRSIEIG GFDKDFKTER TVENLRWVGM 420 SSKDLEKNFS EDYKTVPIET ISCFQTSEDQ EVRGEIDHQS NFNEFNDREA NDFPFGFTDD 480 NLNDNFLDDS HEVDDFSSTP NFEVHEKIEV SHGLFVSTRQ VAETFFHQIV PSEIVKVYLN 540 PVITTHHSPM TKPDSTTKPK KPWRKIVSPS ITIIALLLTY YCVYFGEHLE DEKLRDSFVD 600 NTSKGVKRRE KDCSNDDEVN KMKKHGGTLM WKNYKKRNWF VGSIGGSICS MVLNQVWPYL 660 TIALALCSIW VHHIAPNSP

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECET PSGLQVQDAY ALCRVFKKSA TGPKIGEHYV GSGSNNNQMS  180
SDHSSSMNDL YSEGRGEDLE SYDYNQMALH HSTSSPNMNI HVGSPTVNTN TSSAATDGNW  240
MRYLSEDAFS FTNPSFSNCG NISYPPSKVD IALECARLQH RLSMPPLEVH DFPQGGFVDL  300
RIPQSDSIRS HNPNDHEEHD ILQEILSVAQ ASQELINQDM TWGVTSGGGS FYAQQAGDDF  360
SFHPHAVQIH DMMNNGGGGG SSRLIMEDQQ HTISRSIEIG GFDKDFKTER TVENLRWVGM  420
SSKDLEKNFS EDYKTVPIET ISCFQTSEDQ EVRGEIDHQS NFNEFNDREA NDFPFGFTDD  480
NLNDNFLDDS HEVDDFSSTP NFEVHEKIEV SHGLFVSTRQ VAETFFHQIV PSEIVKVYLN  540
PVITTHHSPM TKPDSTTKPK KPWRKIVSPS ITIIALLLTY YCVYFGEHLE DEKLRDSFVD  600
NTSKGVKRRE KDCSNDDEVN KMKKHGGTLM WKNYKKRNWF VGSIGGSICS MVLNQVWPYL  660
TIALALCSIW VHHIAPNSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-162	NAC family protein