PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066604.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 711aa MW: 80098.2 Da PI: 4.9937

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.5	5.9e-05	621	681	1	54
TT--SS--HHHHHHHHHHHHHSSS--H..HHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsa..eereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+ + e++ ++ +++ ++ + A+kl ++t++q k+W Nr+a+ XP_028066604.1 621 KRKRTIMNDEQIAVIERALLDEPDMQRnfTSVQSWADKLslhgsEVTTSQLKNWLNNRKAR 681 79****************988887733699***9999999************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
MSDAMAGPSS RPQRQAIDLI SAVKELHRLS SLELNKLIRE SRNNILHIVT ETGSSIQIDV 60 ENLARYLPMH LMARMMMLAE RDEALFQYLL CGVRLLHSLC DLAPRHSILE QILLDDVKVS 120 VQLLDLIIFL LIFLSNYRQE HHTSSPMPLL HSALVACSLY LLTGCISSQW QELALVLVSH 180 SQVDVFMDTA FAALRLDIKF LHIKLSGQCT EGTLNYLSQQ CEASLQFLQS LCQQKLFRER 240 LVKNKVLELL KTMIVRDPKQ LACSDKNYPT GLLQLNAMRL ADIFSDDSNF RSYIMIYYTE 300 VLTAIFALPH QEFLSNWCSS DLPTREEDAT LEYDLFAAAG CVLDSSSSSD LPNVMNSGPN 360 FIPINIPWAS YAHQRSSLLV KIIANLHCFV PEICKEEKDV FLDKFLECLQ REQPISPASD 420 AEKAVTVSSN LCSLLSHAES LTPSFLNKED VHLLRVFFMQ LESLITSAEF ENRVQENKFE 480 GSECGDKLSK LNISEHFQEN QKSAGGCSSP LLDNIGPDHT NRIGNLKEGM SEKFDFQEED 540 QLYVRSSCID QTGDMMLQDK EEDKSKYGTE AGGFREIQNV ETSGSDSSST REKNSKESGI 600 GGVLEDEKVE DVQCEEKQQR KRKRTIMNDE QIAVIERALL DEPDMQRNFT SVQSWADKLS 660 LHGSEVTTSQ LKNWLNNRKA RLTRAAKDGR APSVGDNVFP DKQGVSGIVS L

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

MSDAMAGPSS RPQRQAIDLI SAVKELHRLS SLELNKLIRE SRNNILHIVT ETGSSIQIDV  60
ENLARYLPMH LMARMMMLAE RDEALFQYLL CGVRLLHSLC DLAPRHSILE QILLDDVKVS  120
VQLLDLIIFL LIFLSNYRQE HHTSSPMPLL HSALVACSLY LLTGCISSQW QELALVLVSH  180
SQVDVFMDTA FAALRLDIKF LHIKLSGQCT EGTLNYLSQQ CEASLQFLQS LCQQKLFRER  240
LVKNKVLELL KTMIVRDPKQ LACSDKNYPT GLLQLNAMRL ADIFSDDSNF RSYIMIYYTE  300
VLTAIFALPH QEFLSNWCSS DLPTREEDAT LEYDLFAAAG CVLDSSSSSD LPNVMNSGPN  360
FIPINIPWAS YAHQRSSLLV KIIANLHCFV PEICKEEKDV FLDKFLECLQ REQPISPASD  420
AEKAVTVSSN LCSLLSHAES LTPSFLNKED VHLLRVFFMQ LESLITSAEF ENRVQENKFE  480
GSECGDKLSK LNISEHFQEN QKSAGGCSSP LLDNIGPDHT NRIGNLKEGM SEKFDFQEED  540
QLYVRSSCID QTGDMMLQDK EEDKSKYGTE AGGFREIQNV ETSGSDSSST REKNSKESGI  600
GGVLEDEKVE DVQCEEKQQR KRKRTIMNDE QIAVIERALL DEPDMQRNFT SVQSWADKLS  660
LHGSEVTTSQ LKNWLNNRKA RLTRAAKDGR APSVGDNVFP DKQGVSGIVS L