PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028066603.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HB-other | ||||||||
Protein Properties | Length: 780aa MW: 87622.1 Da PI: 5.0345 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.4 | 6.7e-05 | 697 | 757 | 1 | 54 |
TT--SS--HHHHHHHHHHHHHSSS--H..HHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsa..eereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+ + e++ ++ +++ ++ + A+kl ++t++q k+W Nr+a+ XP_028066603.1 697 KRKRTIMNDEQIAVIERALLDEPDMQRnfTSVQSWADKLslhgsEVTTSQLKNWLNNRKAR 757 79******************988887733699*******9999999**************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 780 aa Download sequence |
MSDAMAGPSS RPQRQAIDLI SAVKELHRLS SLELNKLIRE SRNNILHIVT ETGSSIQIDV 60 ENLARYLPMH LMARMMMLAE RDEALFQYLL CGVRLLHSLC DLAPRHSILE QILLDDVKVS 120 VQLLDLIIFL LIFLSNYRQE HHTSSPMPLL HSALVACSLY LLTGCISSQW QELALVLVSH 180 SQVDVFMDTA FAALRLDIKF LHIKLSGQCT EGTLNYLSQQ CEASLQFLQS LCQQKLFRER 240 LVKNKELCGK GGVLLLARAI LNLEVTPLFK ESFSVVAAIS RLKSKILSIL LHLCEAESIS 300 FLDEVARTPQ SMDLAKSVAL EVLELLKTMI VRDPKQLACS DKNYPTGLLQ LNAMRLADIF 360 SDDSNFRSYI MIYYTEVLTA IFALPHQEFL SNWCSSDLPT REEDATLEYD LFAAAGCVLD 420 SSSSSDLPNV MNSGPNFIPI NIPWASYAHQ RSSLLVKIIA NLHCFVPEIC KEEKDVFLDK 480 FLECLQREQP ISPASDAEKA VTVSSNLCSL LSHAESLTPS FLNKEDVHLL RVFFMQLESL 540 ITSAEFENRV QENKFEGSEC GDKLSKLNIS EHFQENQKSA GGCSSPLLDN IGPDHTNRIG 600 NLKEGMSEKF DFQEEDQLYV RSSCIDQTGD MMLQDKEEDK SKYGTEAGGF REIQNVETSG 660 SDSSSTREKN SKESGIGGVL EDEKVEDVQC EEKQQRKRKR TIMNDEQIAV IERALLDEPD 720 MQRNFTSVQS WADKLSLHGS EVTTSQLKNW LNNRKARLTR AAKDGRAPSV GDNVFPDKQG |