PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066602.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 787aa MW: 88277.9 Da PI: 5.0345

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.4	6.8e-05	697	757	1	54
TT--SS--HHHHHHHHHHHHHSSS--H..HHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsa..eereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+ + e++ ++ +++ ++ + A+kl ++t++q k+W Nr+a+ XP_028066602.1 697 KRKRTIMNDEQIAVIERALLDEPDMQRnfTSVQSWADKLslhgsEVTTSQLKNWLNNRKAR 757 79****************988887733699***9999999************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MSDAMAGPSS RPQRQAIDLI SAVKELHRLS SLELNKLIRE SRNNILHIVT ETGSSIQIDV 60 ENLARYLPMH LMARMMMLAE RDEALFQYLL CGVRLLHSLC DLAPRHSILE QILLDDVKVS 120 VQLLDLIIFL LIFLSNYRQE HHTSSPMPLL HSALVACSLY LLTGCISSQW QELALVLVSH 180 SQVDVFMDTA FAALRLDIKF LHIKLSGQCT EGTLNYLSQQ CEASLQFLQS LCQQKLFRER 240 LVKNKELCGK GGVLLLARAI LNLEVTPLFK ESFSVVAAIS RLKSKILSIL LHLCEAESIS 300 FLDEVARTPQ SMDLAKSVAL EVLELLKTMI VRDPKQLACS DKNYPTGLLQ LNAMRLADIF 360 SDDSNFRSYI MIYYTEVLTA IFALPHQEFL SNWCSSDLPT REEDATLEYD LFAAAGCVLD 420 SSSSSDLPNV MNSGPNFIPI NIPWASYAHQ RSSLLVKIIA NLHCFVPEIC KEEKDVFLDK 480 FLECLQREQP ISPASDAEKA VTVSSNLCSL LSHAESLTPS FLNKEDVHLL RVFFMQLESL 540 ITSAEFENRV QENKFEGSEC GDKLSKLNIS EHFQENQKSA GGCSSPLLDN IGPDHTNRIG 600 NLKEGMSEKF DFQEEDQLYV RSSCIDQTGD MMLQDKEEDK SKYGTEAGGF REIQNVETSG 660 SDSSSTREKN SKESGIGGVL EDEKVEDVQC EEKQQRKRKR TIMNDEQIAV IERALLDEPD 720 MQRNFTSVQS WADKLSLHGS EVTTSQLKNW LNNRKARLTR AAKDGRAPSV GDNVFPDKQG 780 VSGIVSL

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MSDAMAGPSS RPQRQAIDLI SAVKELHRLS SLELNKLIRE SRNNILHIVT ETGSSIQIDV  60
ENLARYLPMH LMARMMMLAE RDEALFQYLL CGVRLLHSLC DLAPRHSILE QILLDDVKVS  120
VQLLDLIIFL LIFLSNYRQE HHTSSPMPLL HSALVACSLY LLTGCISSQW QELALVLVSH  180
SQVDVFMDTA FAALRLDIKF LHIKLSGQCT EGTLNYLSQQ CEASLQFLQS LCQQKLFRER  240
LVKNKELCGK GGVLLLARAI LNLEVTPLFK ESFSVVAAIS RLKSKILSIL LHLCEAESIS  300
FLDEVARTPQ SMDLAKSVAL EVLELLKTMI VRDPKQLACS DKNYPTGLLQ LNAMRLADIF  360
SDDSNFRSYI MIYYTEVLTA IFALPHQEFL SNWCSSDLPT REEDATLEYD LFAAAGCVLD  420
SSSSSDLPNV MNSGPNFIPI NIPWASYAHQ RSSLLVKIIA NLHCFVPEIC KEEKDVFLDK  480
FLECLQREQP ISPASDAEKA VTVSSNLCSL LSHAESLTPS FLNKEDVHLL RVFFMQLESL  540
ITSAEFENRV QENKFEGSEC GDKLSKLNIS EHFQENQKSA GGCSSPLLDN IGPDHTNRIG  600
NLKEGMSEKF DFQEEDQLYV RSSCIDQTGD MMLQDKEEDK SKYGTEAGGF REIQNVETSG  660
SDSSSTREKN SKESGIGGVL EDEKVEDVQC EEKQQRKRKR TIMNDEQIAV IERALLDEPD  720
MQRNFTSVQS WADKLSLHGS EVTTSQLKNW LNNRKARLTR AAKDGRAPSV GDNVFPDKQG  780
VSGIVSL