PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065959.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 478aa MW: 52344.4 Da PI: 5.4037

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	256	310	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtpeLHe+Fveav++LGGsekAtPk +l++mkv+gLt++hvkSHLQkYR+ XP_028065959.1 256 KMRMRWTPELHEAFVEAVNKLGGSEKATPKGVLKVMKVEGLTIYHVKSHLQKYRT 310 67****************************************************8 PP
2	Myb_DNA-binding	54.9	1.9e-17	258	309	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ XP_028065959.1 258 RMRWTPELHEAFVEAVNKLGGSekaTPKGVLKVMKvEGLTIYHVKSHLQKYR 309 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MEARPARHLS TLGAYGALSS SLPVLPSTLE EKYPKLPNSQ QVWMERELNT NSPSLHSSFL 60 SNSGVVGPIF SSTSGYFNDL HLTSFAPPEK HSRKSPFISQ SSNAGASMPL APCHSKMLQS 120 TASSKSDSWC TDSLPDFFDY PVNTSSSKIQ IGSRVNGGCA MATEDLSKRN DWQDWADLIN 180 DDDSLNSSLN GLFVDNNAED PELKVLIKEM TNYSEQQSEV LQQISVPSEE SPRALPSEES 240 TRALNSTSSA SGGPTKMRMR WTPELHEAFV EAVNKLGGSE KATPKGVLKV MKVEGLTIYH 300 VKSHLQKYRT ARCQPESSSE GASEKKLTSI EEVASLDLKT GIELTEALRL QMEVQKRLHE 360 QLEIQRNLQL RIEEQGRYLQ MMFEKQCKAG DMLKASSSSA PTLENPSAKT TADAIPSSIA 420 KDVSESENDN TIMASSVQAS RKMGEKQKAP ESKASEDLEA NDVVGSSSRP SKRARADE

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MEARPARHLS TLGAYGALSS SLPVLPSTLE EKYPKLPNSQ QVWMERELNT NSPSLHSSFL  60
SNSGVVGPIF SSTSGYFNDL HLTSFAPPEK HSRKSPFISQ SSNAGASMPL APCHSKMLQS  120
TASSKSDSWC TDSLPDFFDY PVNTSSSKIQ IGSRVNGGCA MATEDLSKRN DWQDWADLIN  180
DDDSLNSSLN GLFVDNNAED PELKVLIKEM TNYSEQQSEV LQQISVPSEE SPRALPSEES  240
TRALNSTSSA SGGPTKMRMR WTPELHEAFV EAVNKLGGSE KATPKGVLKV MKVEGLTIYH  300
VKSHLQKYRT ARCQPESSSE GASEKKLTSI EEVASLDLKT GIELTEALRL QMEVQKRLHE  360
QLEIQRNLQL RIEEQGRYLQ MMFEKQCKAG DMLKASSSSA PTLENPSAKT TADAIPSSIA  420
KDVSESENDN TIMASSVQAS RKMGEKQKAP ESKASEDLEA NDVVGSSSRP SKRARADE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	6e-90	G2-like family protein