PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065674.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 341aa MW: 39198.5 Da PI: 8.3267

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	144.3	3.2e-45	40	135	23	118
CG-1 23 kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 + +++++l + +sgsl+L+nrk++ryf kDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqrr+ywlLeee+++ivlvhy+ev XP_028065674.1 40 RSSVWEKLGSLRSSGSLFLFNRKVLRYFGKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWLLEEERSNIVLVHYREV 134 3356778888899********************************************************************************98 PP CG-1 118 k 118 k XP_028065674.1 135 K 135 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MFLPPNPPSL ALSACVLSSS ALIDRAFEVV NHLHGNSKWR SSVWEKLGSL RSSGSLFLFN 60 RKVLRYFGKD GHNWRKKKDG KTVKEAHERL KAGSVDVLHC YYAHGEENEN FQRRSYWLLE 120 EERSNIVLVH YREVKRSGRS LDKSISMLQM ELAVTQSSQE MRRSDEFTHI SELTHEGLPR 180 KKAFIVIGIN SAFSSRKRCD SVRQTWMPQG ERLLQLEQEK GIIMRFMIGH SATSNSILDR 240 AIDSEDSQHK DFLRLEHVEG YHELSAKTKI FSSTAVAKWD ADFYVKVDND VHVNLGSWVL 300 FCCSGMCACT CCCCCNICSS NPYNWYWDTN EGARSTIQCY R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	4e-41	CAMTA family protein