PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065122.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 397aa MW: 45174.9 Da PI: 6.7454

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.4	1.8e-21	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rksk +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCk +++++ + gk++vt+++ +HnHela XP_028065122.1 92 FYNAYAKAKGFSIRKSKFNTN-KEGKVVSRLWLCSREGQRLPKYLDrdAEKSRAPKALTRVGCKTQFRIRYNAdageGGKYVVTHFVADHNHELA 185 9**************9999.666699999*****99876655899999************998777789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MAPAEVKREG DDYDIPNKAD DIRLMNESRA EPYHGCEAGL SNGKATNMNV EDDGVDVKKE 60 MVDDAHRNDM VGDVEHAILK QKFDSVEDGE AFYNAYAKAK GFSIRKSKFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDRDAE KSRAPKALTR VGCKTQFRIR YNADAGEGGK YVVTHFVADH 180 NHELAEQHCV MYLRSHRSLN SIDKAQAMAM CNVGVKTSQI MDYMINQSGS YENVCFIRMD 240 LYNHIQAERK AEVQDGDAQD SKSWADYAKF GDVLIFDSTY RTNAYKKPFV MLAGVISHFR 300 TTIFACVFLA NETSETYIWV WETFMEAMGN KAPVSVLTNG DKAMREAFRR VFSDARHRLC 360 NWHLGKNAVS NVHINGFAHA FKQCMDMEMD ETNFEQG

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MAPAEVKREG DDYDIPNKAD DIRLMNESRA EPYHGCEAGL SNGKATNMNV EDDGVDVKKE  60
MVDDAHRNDM VGDVEHAILK QKFDSVEDGE AFYNAYAKAK GFSIRKSKFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRDAE KSRAPKALTR VGCKTQFRIR YNADAGEGGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRSLN SIDKAQAMAM CNVGVKTSQI MDYMINQSGS YENVCFIRMD  240
LYNHIQAERK AEVQDGDAQD SKSWADYAKF GDVLIFDSTY RTNAYKKPFV MLAGVISHFR  300
TTIFACVFLA NETSETYIWV WETFMEAMGN KAPVSVLTNG DKAMREAFRR VFSDARHRLC  360
NWHLGKNAVS NVHINGFAHA FKQCMDMEMD ETNFEQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-54	FAR1 family protein