PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028064150.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 310aa    MW: 34697.1 Da    PI: 9.9288
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028064150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind341.81.7e-10413101301
       GAGA_bind   1 mdddgsre..rnkg.yye...............paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 
                     mdd g++e  r++  +y+               +a+++   +++++m +iae+d++i+ern a se++aa+ er++a +qrd a+a r+ a+ er
  XP_028064150.1   1 MDDGGQHEngRHRMdFYKgvhtpwnmmpqyqmkEANAF--YMNKKIMHIIAEKDNAIEERNRATSERNAAIEERNEAIKQRDDAIAARDTAIRER 93 
                     89999888899998899999999999966654222444..499**************************************************** PP

       GAGA_bind  78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkse 172
                     d++++al ++ens      +++++ +gtk ++++ + +   +++ a+++re ++++a pi+   ++a ++ + k+ +++k + ++ +k + +k++
  XP_028064150.1  94 DSAIAALRFQENS------MNCGIQRGTKRMHHSSN-HPASVTEAAYNAREAQITDAIPITAVSSKAAKSCQAKRAKENKAAPSNVSK-PPRKGK 180
                     *********9997......6799*********8887.6699******************99877777777666655555544444444.333355 PP

       GAGA_bind 173 kskkkvkkesaderskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafk 266
                     k  ++ +++ + + skae++ ++l  +n+v++Dest+P+PvCsCtG++rqCYkWGnGGWqS+CCttt+SvyPLP+++++r++R++grKmS+++f+
  XP_028064150.1 181 KVGEDLNRHVTTDGSKAEWDAQELgLINQVTFDESTMPAPVCSCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQMPNKRHSRLGGRKMSGSVFS 275
                     555666666666679*********668******************************************************************** PP

       GAGA_bind 267 klLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +lL++Laa+Gy+ls pvDL+++WAkHGtn+++ti+
  XP_028064150.1 276 RLLSRLAADGYNLSVPVDLRNYWAKHGTNRYITIK 310
                     **********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDDGGQHENG RHRMDFYKGV HTPWNMMPQY QMKEANAFYM NKKIMHIIAE KDNAIEERNR  60
ATSERNAAIE ERNEAIKQRD DAIAARDTAI RERDSAIAAL RFQENSMNCG IQRGTKRMHH  120
SSNHPASVTE AAYNAREAQI TDAIPITAVS SKAAKSCQAK RAKENKAAPS NVSKPPRKGK  180
KVGEDLNRHV TTDGSKAEWD AQELGLINQV TFDESTMPAP VCSCTGVPRQ CYKWGNGGWQ  240
SSCCTTTLSV YPLPQMPNKR HSRLGGRKMS GSVFSRLLSR LAADGYNLSV PVDLRNYWAK  300
HGTNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-106BBR-BPC family protein