PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063288.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 265aa MW: 29073.9 Da PI: 8.2136

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.8	1.1e-09	75	121	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN + +L l+P +K++Ka+ L +++ +k+L XP_028063288.1 75 KNHSEAERRRRERINAHLGTLCGLVPRT-----EKMDKATLLAEVISQVKQL 121 58***********************8.....8**********999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MSLYSWKSSN SDFGSNCLGM FENLGGFSEN WGGGSKSVSQ SLVLDSEGCE LVKTPPVRVG 60 KKSGASEEKV MAALKNHSEA ERRRRERINA HLGTLCGLVP RTEKMDKATL LAEVISQVKQ 120 LKKTATESSE GLIIPMDTDE VRVEPEPNIG GDKNISLRVS LCCDYWPELL SELKHALDAL 180 HLNMVKADIS TLGSRVKNVL VFTSRKDTNG DNAEARQLLV NTVHQALSSI VDKGSALAEY 240 SPRTTLPNKR RRISFYDSSS SSSRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	86	ERRRRE
2	249	253	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	4e-30	bHLH family protein