PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061470.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 563aa MW: 65880 Da PI: 7.2326

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.6	2e-23	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ +k k +++ ++r +v +keg+r+ +k++ ++++raetrtgC+a+l +k+++ gk++vt+++++HnH+l+ XP_028061470.1 25 DFYNTYGGRMGFSIRRDYCRKDKFTNQLIHRLLVYNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgIGKYVVTDFKEKHNHDLV 114 6*****************************************999.9999****************9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MEPENDCDWK PKQGMIFDSE QCAYDFYNTY GGRMGFSIRR DYCRKDKFTN QLIHRLLVYN 60 KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGIGKY VVTDFKEKHN HDLVSPECAH 120 MLPSQRKIST TQAIQLDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ 180 SLAYGEVGNV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY AQFGDVVTFD 240 TTYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDETAESF VWLFENFLEA MSRKAPKTLF 300 TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNK FFFHIEDTNQ 360 WKLEWAEMLD KYDAHENHWL KLTFAVKEKW EWPYARSTWA AGMSTTQLSE SFNAFLKDYI 420 RSDFNLNEFF MHFERVLYEK RYKELEAGYA LCQRLPKVKA TIRMLIQMGN VYTKKIFEEF 480 QNEYFQSIES DIEAIEYGEA STIYTVVDVG NKHARKVKME RDGSLGCNCT KFEREGLCDS 540 PSMQWHSRDI IGKTQLEVPP QYI

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MEPENDCDWK PKQGMIFDSE QCAYDFYNTY GGRMGFSIRR DYCRKDKFTN QLIHRLLVYN  60
KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGIGKY VVTDFKEKHN HDLVSPECAH  120
MLPSQRKIST TQAIQLDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ  180
SLAYGEVGNV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDETAESF VWLFENFLEA MSRKAPKTLF  300
TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNK FFFHIEDTNQ  360
WKLEWAEMLD KYDAHENHWL KLTFAVKEKW EWPYARSTWA AGMSTTQLSE SFNAFLKDYI  420
RSDFNLNEFF MHFERVLYEK RYKELEAGYA LCQRLPKVKA TIRMLIQMGN VYTKKIFEEF  480
QNEYFQSIES DIEAIEYGEA STIYTVVDVG NKHARKVKME RDGSLGCNCT KFEREGLCDS  540
PSMQWHSRDI IGKTQLEVPP QYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-109	FAR1 family protein