PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061335.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 608aa MW: 67956.8 Da PI: 5.5065

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	42.4	1.4e-13	360	405	4	50
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 + + + l ++ ++p+kdAAk +v+ ++ Kr+CR+ GI+ WP Rk+k XP_028061335.1 360 QFTRDYLLQFLKMPLKDAAKMCDVSISTFKRKCRECGIPKWP-RKVK 405 5677889999********************************.6776 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MYYTYEEYPQ RDDAIKSAVQ TSMAFPVIDP SSSRCVGVLE LLFTRVFFNA LYIVNKVNAE 60 LQDAGLEKSD TCGHIVTPVD YKAHNQVLVE LSKGIKVVCE THKLLLSLAW VPCSCGRDAE 120 LDGSCNKRYV SCKGQVVNTI VCMETFYASD VCNQGFVNSC SDYYIRTGHG VVGSALRSYS 180 PCFCEDVTRF SKTEYPLVHF ARAYRLTSSF AICLRSTHTG DVNYVIEFFL PGNIESDPVP 240 RTLLYSILAR MKQHFRNFTV ASGETLGQEL SIEVLKDRRL WHSSQICRIT ISTLTLVWPN 300 VGKTVQPDAT NQQLMVEADA MNSERNVVGP EQNNGDDVIY SENKGFVRTL MEQKRGTGNQ 360 FTRDYLLQFL KMPLKDAAKM CDVSISTFKR KCRECGIPKW PRKVKRKGPL TQRNQENESV 420 QRAKDRATRP TVASVEPSAL AISAQPEEPQ GEMVIENKGT SHDFRNLCSN PITPEACHQD 480 LNLGLHVAGT SMTNEPLDYF DCDNVSTVQP ETPMENESIQ GAEGRTACLT VSFVEPSALA 540 ISAQPEEPQG EMVIENERTS HDFRNPCPNP TTAEACHQSL NLDLHLVGAS MANEPSDSWF 600 DYDHFSIV

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MYYTYEEYPQ RDDAIKSAVQ TSMAFPVIDP SSSRCVGVLE LLFTRVFFNA LYIVNKVNAE  60
LQDAGLEKSD TCGHIVTPVD YKAHNQVLVE LSKGIKVVCE THKLLLSLAW VPCSCGRDAE  120
LDGSCNKRYV SCKGQVVNTI VCMETFYASD VCNQGFVNSC SDYYIRTGHG VVGSALRSYS  180
PCFCEDVTRF SKTEYPLVHF ARAYRLTSSF AICLRSTHTG DVNYVIEFFL PGNIESDPVP  240
RTLLYSILAR MKQHFRNFTV ASGETLGQEL SIEVLKDRRL WHSSQICRIT ISTLTLVWPN  300
VGKTVQPDAT NQQLMVEADA MNSERNVVGP EQNNGDDVIY SENKGFVRTL MEQKRGTGNQ  360
FTRDYLLQFL KMPLKDAAKM CDVSISTFKR KCRECGIPKW PRKVKRKGPL TQRNQENESV  420
QRAKDRATRP TVASVEPSAL AISAQPEEPQ GEMVIENKGT SHDFRNLCSN PITPEACHQD  480
LNLGLHVAGT SMTNEPLDYF DCDNVSTVQP ETPMENESIQ GAEGRTACLT VSFVEPSALA  540
ISAQPEEPQG EMVIENERTS HDFRNPCPNP TTAEACHQSL NLDLHLVGAS MANEPSDSWF  600
DYDHFSIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	2e-68	Nin-like family protein