PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028061101.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 436aa MW: 49381 Da PI: 9.2049

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028061101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.2	4.5e-16	17	106	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv++p + + l+lp f+++ +g+k s + +l++ s +W vk k+s++ + + +GW +Fv +gL+ gDfvvF+++ + f +v XP_028061101.1 17 FFKVMVP--GFLT-KLSLPPAFCRKVSGEK--SEEAVLTS-SQGTWHVKT--GKCSKGlICFNEGWDKFVGHHGLNLGDFVVFEHKADLHF--NV 101 6677743..3333.499*******8885..44677666.6679*..999999999*********************8765555..99 PP EEE-S CS B3 95 kvfrk 99 +vf++ XP_028061101.1 102 SVFDS 106 99986 PP
2	B3	59.4	6.1e-19	343	426	15	94
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +++p kf++e ++++++s ltl+d+sg+ W vkl + ++ks ++++tkGW eF +n+Lk+gD+++F+l+++ +++++v+ XP_028061101.1 343 KVYIPVKFLKESDLSENGS--LTLRDPSGKPWPVKLHFsrsgfSGKSLQVYMTKGWYEFYTSNKLKDGDVCLFELNRTvTRGRPVM 426 579*******9998775..***********8877777777777************************99888888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MSSTDMEGKL LPISRHFFKV MVPGFLTKLS LPPAFCRKVS GEKSEEAVLT SSQGTWHVKT 60 GKCSKGLICF NEGWDKFVGH HGLNLGDFVV FEHKADLHFN VSVFDSSACV KEFPASDQVF 120 VPSISEREFP AKLGNDQRKR AHGDQVFDPS TCKKEISAKL DNDQIKRATG VQVPGKKEYP 180 AKLGNDQRKS TRGDQVFDPS TCENEIHAKL GNDQRKRPHC DQMFDPSTCE REFIAKLAND 240 QRRREPSDPA FDPSACEKEF PAKLGYDQRK RGPGDQINIH EHGKHIKKVM ENWNPVFNNR 300 SLSSDHKRFC RKSPLEEAAT YIPGGPHFIT TMSYGHGTSH YPKVYIPVKF LKESDLSENG 360 SLTLRDPSGK PWPVKLHFSR SGFSGKSLQV YMTKGWYEFY TSNKLKDGDV CLFELNRTVT 420 RGRPVMMDVR IFPLQT

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MSSTDMEGKL LPISRHFFKV MVPGFLTKLS LPPAFCRKVS GEKSEEAVLT SSQGTWHVKT  60
GKCSKGLICF NEGWDKFVGH HGLNLGDFVV FEHKADLHFN VSVFDSSACV KEFPASDQVF  120
VPSISEREFP AKLGNDQRKR AHGDQVFDPS TCKKEISAKL DNDQIKRATG VQVPGKKEYP  180
AKLGNDQRKS TRGDQVFDPS TCENEIHAKL GNDQRKRPHC DQMFDPSTCE REFIAKLAND  240
QRRREPSDPA FDPSACEKEF PAKLGYDQRK RGPGDQINIH EHGKHIKKVM ENWNPVFNNR  300
SLSSDHKRFC RKSPLEEAAT YIPGGPHFIT TMSYGHGTSH YPKVYIPVKF LKESDLSENG  360
SLTLRDPSGK PWPVKLHFSR SGFSGKSLQV YMTKGWYEFY TSNKLKDGDV CLFELNRTVT  420
RGRPVMMDVR IFPLQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31680.1	3e-15	B3 family protein