PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028060878.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HB-other | ||||||||
Protein Properties | Length: 95aa MW: 11444.2 Da PI: 9.9211 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.1 | 1.3e-17 | 13 | 67 | 7 | 57 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +t eq+e+Le+++ ++++ps +r++L + + +++ +q+kvWFqNrR +ek+ XP_028060878.1 13 YTGEQVEALERVYVECPKPSSLHRQQLIRDCpilsNIEPKQIKVWFQNRRCQEKQ 67 899**************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MNRHLDAGKY VWYTGEQVEA LERVYVECPK PSSLHRQQLI RDCPILSNIE PKQIKVWFQN 60 RRCQEKQRKE ASRLQTVNRK MTAMNKLLME ENDRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 1e-54 | HD-ZIP family protein |