PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060627.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 851aa MW: 96913.6 Da PI: 7.7643

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.1	2e-25	99	186	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 +fYn+Y++++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHe XP_028060627.1 99 DFYNAYGRRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVNKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHE 186 6*****************************************999.9999***************99*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
MERAQTANQL RSEAKDRANA SEESLELAKE EFAKGKAELK ELKAAKEKAE SEVSMALEAG 60 RSAAFMEYLC FYMDMEPDND CGWKPKVGMT FDSEESAYDF YNAYGRRMGF SIRREYCKKN 120 KLTKQIISRN LVCNKEGFRK VNKRDPLTKT PRAETRTGCE ARLFVKLDVN SGKFVVIDFK 180 EKHNHEHVSL DCAHMLSSQR KISDTQAIEL DLASESGLCL GQSFELMGRE AGGKSLDNEE 240 QITNMFWADA QMVMDYAQFG DVVTFDTTYK LNKEHRPFAS FVGCNHHRET VVFGAALLYD 300 KTAETFVWLF QTFLEAMSKK APKTLFTDED AAMAKAIPIV MPDTSHRLCT WHLMQNALRH 360 VGEMLDTYDA HDNHWLKLIF GVKEKWGWPY VRSTWVAGMS TTQLSESFNA FLKDYIRSDF 420 NLNEFFMHFE RVHCEKRYKE LETGYALCQR LPRVRAPFIM LSQMDNVYTK NIFEEFQDEY 480 FLSVESEIQA IEYIDGCSLY TVVDAIGKNA RKVTMEMDGS LACSCSKFEK KGILCSHCLK 540 VMREILKLKE IPSQYIMKRW TKQAREEAVM DKLGNEIQID VKFKQASRYK TLMTAFRSIA 600 CRAAETEESY DFCCSQVAAL GADVKSKISA HFCPEKEVSI NDQPQTCEQE DNNHVVKIPI 660 GLKKKHPTSK GKRRIKGPCE LALQASFKKK SRAQFLSSSR PVAAPTVRPS PLSIGGDVSI 720 YENVTPLHPP LAPPPPPHSV AMGGTIPLPL IYPTYNANNL AYCGQPTFMT LLQGGYAIGF 780 EDSQGSQTGS RPTNNLMLYT EVLLLLIWVW MAMKRWKALQ ISCIGDASEL LYLTLMLMLK 840 LKYLIVKLVE W

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

MERAQTANQL RSEAKDRANA SEESLELAKE EFAKGKAELK ELKAAKEKAE SEVSMALEAG  60
RSAAFMEYLC FYMDMEPDND CGWKPKVGMT FDSEESAYDF YNAYGRRMGF SIRREYCKKN  120
KLTKQIISRN LVCNKEGFRK VNKRDPLTKT PRAETRTGCE ARLFVKLDVN SGKFVVIDFK  180
EKHNHEHVSL DCAHMLSSQR KISDTQAIEL DLASESGLCL GQSFELMGRE AGGKSLDNEE  240
QITNMFWADA QMVMDYAQFG DVVTFDTTYK LNKEHRPFAS FVGCNHHRET VVFGAALLYD  300
KTAETFVWLF QTFLEAMSKK APKTLFTDED AAMAKAIPIV MPDTSHRLCT WHLMQNALRH  360
VGEMLDTYDA HDNHWLKLIF GVKEKWGWPY VRSTWVAGMS TTQLSESFNA FLKDYIRSDF  420
NLNEFFMHFE RVHCEKRYKE LETGYALCQR LPRVRAPFIM LSQMDNVYTK NIFEEFQDEY  480
FLSVESEIQA IEYIDGCSLY TVVDAIGKNA RKVTMEMDGS LACSCSKFEK KGILCSHCLK  540
VMREILKLKE IPSQYIMKRW TKQAREEAVM DKLGNEIQID VKFKQASRYK TLMTAFRSIA  600
CRAAETEESY DFCCSQVAAL GADVKSKISA HFCPEKEVSI NDQPQTCEQE DNNHVVKIPI  660
GLKKKHPTSK GKRRIKGPCE LALQASFKKK SRAQFLSSSR PVAAPTVRPS PLSIGGDVSI  720
YENVTPLHPP LAPPPPPHSV AMGGTIPLPL IYPTYNANNL AYCGQPTFMT LLQGGYAIGF  780
EDSQGSQTGS RPTNNLMLYT EVLLLLIWVW MAMKRWKALQ ISCIGDASEL LYLTLMLMLK  840
LKYLIVKLVE W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-94	FAR1 family protein