PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059786.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 336aa    MW: 37973 Da    PI: 4.5694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-11169212654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_028059786.1 169 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 212
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEYNEQGFLE ELLALRTDSL EATIPTVGMS TGFYNNGWST DCFTENPIPV PPNSSFEDFS  60
LPLDHQTLNC SSFTEFYCPF GDDFSAPNKL HHTPQFPTQE DYSVSMMDDN NEEQSLVGNN  120
VLHNLELQAS NCKLEPIQST QVPVFDTGLC LEERKSKVKK VGGQPSKNLM AERRRRKRLN  180
DRLSMLRSVV PKISKMDRTS ILGDTIDYMK ELLERINNLQ EEIEVGSPNQ LNLLNIFKDV  240
KPNEVLVRNS PKFDVERRNV DTRIEICCAA KPGLLLSTVT SLEALGLEIQ QCVISCFNDF  300
AMQASCSEEM EQRAMLSSED IKQALFRNAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172179ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.19e-88bHLH family protein