PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059272.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 377aa    MW: 41242.7 Da    PI: 6.1912
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-10219267355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  XP_028059272.1 219 NSHSLAERVRRERISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 267
                     58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MGTDEDRANM GFQHRNGDNS MFISSSGADH PFFGSGWDPL VSLSQSENFE GSSVIPHTFG  60
VHYPSDSGLV DMVPKLPPCF GSGSFSEMVG SFGQPECGQT ARTEKTSTNG APPQGDQQIS  120
EEGTLGISHS GKRKKRVSES NSPFNPSKNG EGEQEKDISA ESSEYQKEQD EKKQKIDQNM  180
SVNLRGKQTG KQAKDNSSNG DASKENYIHV RARRGQATNS HSLAERVRRE RISERMKLLQ  240
ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV NPQLNVDIDR IISKEILHLR  300
GSGAAIPGFD PGSSSSHLYP LGIQQGTFPG IPSASPFHLM PQNVWDNDLQ SFLQMGFDSN  360
PAISNLEPNA GRSKLER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-69bHLH family protein