PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057993.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 599aa MW: 68986.9 Da PI: 8.4347

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.6	1.6e-26	27	116	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r++ +k+k n++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+ XP_028057993.1 27 DFYNTYGGRMGFSIRRDFCRKNKINNQLICRLLVCNKEGFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDEgTGKYVVTDFKEKHNHDLV 116 6*****************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MDMEPENDCA WKPKQGMTFD SEQCVYDFYN TYGGRMGFSI RRDFCRKNKI NNQLICRLLV 60 CNKEGFRKGD KRDPLSKNPR AETRTGCEAR LYVKLDEGTG KYVVTDFKEK HNHDLVSPEC 120 AHMLPSQRKI STTQAIELDL AAQSGLRLGQ SFELMGREAG GRQCLGFTKL DQKNYLRTKR 180 QQSLAYGEVG NVLQYFKEKS LQNPSFFYAF QLDNEEQITN MFWADAQMIM DYAQFGDVVT 240 FDTTYKLNKE HRPFASFVGF NHHRETVIFG AALLYDETAE SFVWLFQNFL QAMSGKAPKT 300 LFTDQDAAMA KAIPIVMPDT SHRLCTWHLM QNALKHDYIR SDFNLNEFFM HFERVLYEKR 360 YKELESRICF VPKVAKGESN NKNLIQMGNV YTKKIFEEFQ NEYFRSIESD IEAIEYGEAS 420 TFTQLLMLVI RDILKMKEVP PQYILKRWTK QARAETVKDI KGNDIQWIFA SSQSIASPTV 480 APSPLSVGGE IYCSSTVPPL QPLPPRRHFP PSLPMGGNSI PPSLINPTYH DMYVVHNSVP 540 NLMPQQYPAE PTFQSLLQGS YGYDIGFRYS QNQTVQCGVR PWTSTKTSKL QMKMACKVK

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MDMEPENDCA WKPKQGMTFD SEQCVYDFYN TYGGRMGFSI RRDFCRKNKI NNQLICRLLV  60
CNKEGFRKGD KRDPLSKNPR AETRTGCEAR LYVKLDEGTG KYVVTDFKEK HNHDLVSPEC  120
AHMLPSQRKI STTQAIELDL AAQSGLRLGQ SFELMGREAG GRQCLGFTKL DQKNYLRTKR  180
QQSLAYGEVG NVLQYFKEKS LQNPSFFYAF QLDNEEQITN MFWADAQMIM DYAQFGDVVT  240
FDTTYKLNKE HRPFASFVGF NHHRETVIFG AALLYDETAE SFVWLFQNFL QAMSGKAPKT  300
LFTDQDAAMA KAIPIVMPDT SHRLCTWHLM QNALKHDYIR SDFNLNEFFM HFERVLYEKR  360
YKELESRICF VPKVAKGESN NKNLIQMGNV YTKKIFEEFQ NEYFRSIESD IEAIEYGEAS  420
TFTQLLMLVI RDILKMKEVP PQYILKRWTK QARAETVKDI KGNDIQWIFA SSQSIASPTV  480
APSPLSVGGE IYCSSTVPPL QPLPPRRHFP PSLPMGGNSI PPSLINPTYH DMYVVHNSVP  540
NLMPQQYPAE PTFQSLLQGS YGYDIGFRYS QNQTVQCGVR PWTSTKTSKL QMKMACKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-82	FAR1 family protein