PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057793.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 332aa    MW: 36529.5 Da    PI: 8.6036
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1024.1e-3266118358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     +v YkeClkNhAa+lGg+avDGCgEfmps    +++++lkCaACgCHRnFHRr  e
  XP_028057793.1  66 AVIYKECLKNHAATLGGYAVDGCGEFMPS---PTDPTSLKCAACGCHRNFHRRGDE 118
                     689*************************9...4579*****************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDPTTTTNTN HRGTENETPP PPPPPPPLAA TTAQPNTKSL SFTNGKLKKH SNHPHHHHHP  60
PQPPAAVIYK ECLKNHAATL GGYAVDGCGE FMPSPTDPTS LKCAACGCHR NFHRRGDEPT  120
TTTPTHFLDF HHRPPPPLSV RRSSPSSSSP SPPPPPSYYS AAPHMLLALS AADHHHPEAA  180
VKPTAEENPS GRKRNRTKFS QDQKEKMLSF SEKLGWKMMK SDQGLIESFC NEIGVGRGVL  240
KVWMHNNKNT FGKKDTTTTT INNVSENIND GRVKSENNNG DHHHHQSENN NGVHHHHQSE  300
NNNGVHHLHV SSANGCPPSA QLQLDPKIEC RF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-50ZF-HD family protein