PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056644.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 676aa MW: 78217.2 Da PI: 7.9436

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	6.7e-17	33	120	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY +YAk+vGF + ++++ ++ge++ C++ kr+++++ ++ +++ +t+++Cka+++ +++kdg++++t++ leH+H+l+p XP_028056644.1 33 DFYAKYAKHVGFAIAYRTQNVG-DDGEVKYFGIECTRTRKRTKKSEV--NSLKPSLSTKIDCKARVRASLRKDGRYMLTTVMLEHTHDLTP 120 6***********99987776.9999*********9998766..999**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MDIDSNNPSL NESEEVEEPQ KGMCFSSKQE VYDFYAKYAK HVGFAIAYRT QNVGDDGEVK 60 YFGIECTRTR KRTKKSEVNS LKPSLSTKID CKARVRASLR KDGRYMLTTV MLEHTHDLTP 120 TDSRHFAMNK RFLTLAKRRL EINDEVGIGV AENLHSIVVE AGGYEALTFD ERDARNHIES 180 ARKLRLGVGD GESLRDYFQR MQQQNSNFYY VIDFDEDCRI RNLFWADARS RATYEAFGDV 240 VSFDTTYLTN KYDMPFAPFI GVNHHGQLIL LGCGLLCNES TETFVWLFRS WLSCMSDAPP 300 KAIITDQCKA MQNAIEIVFP KAQHRWCLWH IMKKIPEKLR GYSQYEHIKL ALENAVYDSF 360 TKAEFDKEWQ AMISKFNLYD NEWLGALYGE RHRWVPVYVK DIFWAGMSIA QRSESMSAFF 420 DGYVNSKTTL KQFVELYDNA LRSKVEKEKK ADFKSRHKLY DCLTIYGFEK QFRATYTNAK 480 FKEFQGELKR LIYCNPLLVK EEGSISTYHV KEFVVVDEKL KPMEFVVYYN STECEVQCMC 540 RLFEFRGIMC GHSLCVLIAR CINEVPDKYI MPRWRKDLER GYTFVRTTYT NFGVGFNAKF 600 HDKMQKLLNE IVELASNDEG KQKIIELGLA EIKARVRKDE SGCGSNVSHS TSNVPPFDTS 660 PKSPIGGCTT KTSMSS

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MDIDSNNPSL NESEEVEEPQ KGMCFSSKQE VYDFYAKYAK HVGFAIAYRT QNVGDDGEVK  60
YFGIECTRTR KRTKKSEVNS LKPSLSTKID CKARVRASLR KDGRYMLTTV MLEHTHDLTP  120
TDSRHFAMNK RFLTLAKRRL EINDEVGIGV AENLHSIVVE AGGYEALTFD ERDARNHIES  180
ARKLRLGVGD GESLRDYFQR MQQQNSNFYY VIDFDEDCRI RNLFWADARS RATYEAFGDV  240
VSFDTTYLTN KYDMPFAPFI GVNHHGQLIL LGCGLLCNES TETFVWLFRS WLSCMSDAPP  300
KAIITDQCKA MQNAIEIVFP KAQHRWCLWH IMKKIPEKLR GYSQYEHIKL ALENAVYDSF  360
TKAEFDKEWQ AMISKFNLYD NEWLGALYGE RHRWVPVYVK DIFWAGMSIA QRSESMSAFF  420
DGYVNSKTTL KQFVELYDNA LRSKVEKEKK ADFKSRHKLY DCLTIYGFEK QFRATYTNAK  480
FKEFQGELKR LIYCNPLLVK EEGSISTYHV KEFVVVDEKL KPMEFVVYYN STECEVQCMC  540
RLFEFRGIMC GHSLCVLIAR CINEVPDKYI MPRWRKDLER GYTFVRTTYT NFGVGFNAKF  600
HDKMQKLLNE IVELASNDEG KQKIIELGLA EIKARVRKDE SGCGSNVSHS TSNVPPFDTS  660
PKSPIGGCTT KTSMSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-125	FAR1 family protein